RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ETHE1O95571 254 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 HPP00738 406 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 IGHG3P01860 377 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 FCGR3AP08637 254 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 WNT2P09544 360 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 HSD17B1P14061 328 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 HOXB6P17509 224 aaKnown RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 BCL3P20749 454 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 CD40LGP29965 261 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 PRDX3P30048 256 aaKnown RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 HTR1FP30939 366 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 FCGR2CP31995 323 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 NSG1P42857 185 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 SLC1A1P43005 524 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 XCR1P46094 333 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 RGRP47804 291 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 NPBWR2P48146 333 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 GSSP48637 474 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 DAP3P51398 398 aaKnown RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 PAX9P55771 341 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF33AQ06730 810 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF33BQ06732 778 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 RIPPLY1Q0D2K3 151 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 STX3Q13277 289 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 MTF1Q14872 753 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 ZIC1Q15915 447 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 SLC22A6Q4U2R8 563 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 XKR4Q5GH76 650 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 WDR38Q5JTN6 314 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 C1orf220Q5T0J3 134 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 WDR25Q64LD2 544 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 NADSYN1Q6IA69 706 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF425Q6IV72 752 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 FAM199XQ6PEV8 388 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 ASCL4Q6XD76 172 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 RBMS3Q6XE24 437 aaKnown RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 PID1Q7Z2X4 250 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 CEACAM19Q7Z692 300 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 MRPL10Q7Z7H8 261 aaKnown RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 HOGA1Q86XE5 327 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 PLCZ1Q86YW0 608 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF547Q8IVP9 402 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 CMTM1Q8IZ96 169 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 SPAG16Q8N0X2 631 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 JAGN1Q8N5M9 183 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 MS4A15Q8N5U1 240 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 METTL27Q8N6F8 245 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 SAMD12Q8N8I0 201 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 C8orf31Q8N9H6 132 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF248Q8NDW4 579 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 LYPD6BQ8NI32 183 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 SLC7A13Q8TCU3 470 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 MAPK15Q8TD08 544 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 NUDCD2Q8WVJ2 157 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNRF4Q8WWF5 429 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 FCAMRQ8WWV6 532 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 ACOT11Q8WXI4 607 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 TM9SF4Q92544 642 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 UFD1Q92890 307 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 NAT6Q93015 286 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 CD101Q93033 1021 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 ISOC2Q96AB3 205 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 MRGPRFQ96AM1 343 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 CCDC124Q96CT7 223 aaKnown RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 MOCOSQ96EN8 888 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 RNF170Q96K19 258 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 JSRP1Q96MG2 331 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 NSMCE3Q96MG7 304 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 RCHY1Q96PM5 261 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 TSSK3Q96PN8 268 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 CSPG4P5Q96PW8 444 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 ALKBH3Q96Q83 286 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 EPYCQ99645 322 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 FAM173AQ9BQD7 235 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 SLC35A5Q9BS91 424 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 CABLES2Q9BTV7 478 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 NSRP1Q9H0G5 558 aaKnown RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 OPN3Q9H1Y3 402 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 OR51M1Q9H341 326 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 PIGUQ9H490 435 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 RANBP3Q9H6Z4 567 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 EBF2Q9HAK2 575 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 IL1RAPQ9NPH3 570 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 MEPEQ9NQ76 525 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 AGPAT4Q9NRZ5 378 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 ZFP57Q9NU63 452 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 GPATCH2LQ9NWQ4 482 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 PAK1IP1Q9NWT1 392 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 THUMPD1Q9NXG2 353 aaKnown RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 MS4A12Q9NXJ0 267 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 STOX2Q9P2F5 926 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 MTRF1LQ9UGC7 380 aaKnown RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 SLC2A6Q9UGQ3 507 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 KCNG2Q9UJ96 466 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 ICAM5Q9UMF0 924 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 POFUT2Q9Y2G5 429 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 FBXO7Q9Y3I1 522 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 USP16Q9Y5T5 823 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 UBN2Q6ZU65 1347 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 NUP160Q12769 1436 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms