RNA–Protein interactions for RNA: ENST00000564343.5

TCF4-223, Transcript of transcription factor 4, human

TSL 4

Gene TCF4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-223	ENST00000564343	UBAP2	Q5T6F2	1119 aa	Known RBP	4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	MORN5	Q5VZ52	161 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	ZNF626	Q68DY1	528 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	HBM	Q6B0K9	141 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	C11orf71	Q6IPW1	123 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	TMEM107	Q6UX40	140 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	CCDC91	Q7Z6B0	441 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	EXOC3L1	Q86VI1	746 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	CCDC25	Q86WR0	208 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	TUSC5	Q8IXB3	177 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	FAM9C	Q8IZT9	166 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	ZNF525	Q8N782	197 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	BANP	Q8N9N5	519 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	GATS	Q8NAP1	163 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	STEAP2	Q8NFT2	490 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	OR4C3	Q8NH37	302 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	OR2V1	Q8NHB1	315 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	RNF128	Q8TEB7	428 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	C16orf78	Q8WTQ4	265 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	HSD17B8	Q92506	261 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	PIK3R3	Q92569	461 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	OSTF1	Q92882	214 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	TRIM63	Q969Q1	353 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	RNF145	Q96MT1	663 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	BBS4	Q96RK4	519 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	ERP44	Q9BS26	406 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	RHNO1	Q9BSD3	238 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	CACNG6	Q9BXT2	260 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	HDHD5	Q9BXW7	423 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	EBPL	Q9BY08	206 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	SRXN1	Q9BYN0	137 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	ACPT	Q9BZG2	426 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	TBL1XR1	Q9BZK7	514 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	SHARPIN	Q9H0F6	387 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	LRTM1	Q9HBL6	345 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	FANCF	Q9NPI8	374 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	GLRX2	Q9NS18	164 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	TMEM160	Q9NX00	188 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	NPAP1	Q9NZP6	1156 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	SENP1	Q9P0U3	644 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	SH3BP4	Q9P0V3	963 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	MCTS1	Q9ULC4	181 aa	Known RBP	4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	SNX6	Q9UNH7	406 aa		4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	C19orf53	Q9UNZ5	99 aa	Predicted RBP	4.54	□□□□□ -1.68
TCF4-223	ENST00000564343	IGHV3-15	A0A0B4J1V0	119 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343		A0A1W2PRB8	838 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343		A8MT66	165 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343		E7EQL1	145 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343		M0R3H8	397 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	MANBA	O00462	879 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	UBFD1	O14562	309 aa	Known RBP	4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	ABCD4	O14678	606 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	RAD51C	O43502	376 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	LMX1B	O60663	402 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	COQ9	O75208	318 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	LYZL6	O75951	148 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	LY6H	O94772	140 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	OXSR1	O95747	527 aa	Predicted RBP	4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	OTC	P00480	354 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	GRP	P07492	148 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	RBP1	P09455	135 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	LINGO3	P0C6S8	592 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	TIA1	P31483	386 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	STX2	P32856	288 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	TTK	P33981	857 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	GABRA3	P34903	492 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	SFTPD	P35247	375 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	HSD17B3	P37058	310 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	MAGEA12	P43365	314 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	HTR6	P50406	440 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	SERPINB8	P50452	374 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	NCBP2	P52298	156 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	PLTP	P55058	493 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	CDH11	P55287	796 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	CARD18	P57730	90 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	GUCY2D	Q02846	1103 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	SLC18A2	Q05940	514 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	SPOCK1	Q08629	439 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	NAB1	Q13506	487 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	HEPACAM	Q14CZ8	416 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	STK11	Q15831	433 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	ZNF239	Q16600	458 aa	Known RBP	4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	NRF1	Q16656	503 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	CPTP	Q5TA50	214 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	AGAP6	Q5VW22	663 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	CYB5R2	Q6BCY4	276 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	C11orf87	Q6NUJ2	197 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	CLEC2A	Q6UVW9	174 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	ZDHHC24	Q6UX98	284 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	BHLHA15	Q7RTS1	189 aa	Predicted RBP	4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	OR2L13	Q8N349	312 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	FBXO25	Q8TCJ0	367 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	MUL1	Q969V5	352 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	ZNF524	Q96C55	264 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	ELP4	Q96EB1	424 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	SH3YL1	Q96HL8	342 aa	Predicted RBP	4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	KLHL15	Q96M94	604 aa		4.53	□□□□□ -1.68
TCF4-223	ENST00000564343	LMF2	Q9BU23	707 aa	Known RBP	4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms