RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	FAM24B	Q8N5W8	94 aa		3.97	□□□□□ -1.77
MACF1-231	ENST00000564288	IQCF1	Q8N6M8	205 aa		3.97	□□□□□ -1.77
MACF1-231	ENST00000564288	CXorf58	Q96LI9	332 aa		3.97	□□□□□ -1.77
MACF1-231	ENST00000564288	RNF24	Q9Y225	148 aa		3.97	□□□□□ -1.77
MACF1-231	ENST00000564288	VEGFD	O43915	354 aa		3.97	□□□□□ -1.77
MACF1-231	ENST00000564288	LMO2	P25791	158 aa		3.97	□□□□□ -1.77
MACF1-231	ENST00000564288	OR51G2	Q8NGK0	314 aa		3.97	□□□□□ -1.77
MACF1-231	ENST00000564288	FIBIN	Q8TAL6	211 aa		3.97	□□□□□ -1.77
MACF1-231	ENST00000564288	AHR	P35869	848 aa		3.97	□□□□□ -1.77
MACF1-231	ENST00000564288	ACVR1B	P36896	505 aa		3.97	□□□□□ -1.77
MACF1-231	ENST00000564288	PNRC1	Q12796	327 aa	Predicted RBP	3.97	□□□□□ -1.77
MACF1-231	ENST00000564288	ECHDC3	Q96DC8	303 aa		3.97	□□□□□ -1.77
MACF1-231	ENST00000564288	BCL2L14	Q9BZR8	327 aa		3.97	□□□□□ -1.77
MACF1-231	ENST00000564288	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	MED6	O75586	246 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	OPN1MW	P04001	364 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	EPHX1	P07099	455 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	OPN1MW2	P0DN77	364 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	OPN1MW3	P0DN78	364 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	TMIGD1	Q6UXZ0	262 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	OR5AK2	Q8NH90	309 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	MS4A3	Q96HJ5	214 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	LYSMD1	Q96S90	227 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	RLIM	Q9NVW2	624 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	CTSL	P07711	333 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	AMD1	P17707	334 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	DOC2A	Q14183	400 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	TIGD5	Q53EQ6	642 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	SFXN4	Q6P4A7	337 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	ZNF738	Q8NE65	137 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	MRGPRX2	Q96LB1	330 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	PEBP4	Q96S96	227 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	ZNF2	Q9BSG1	426 aa	Predicted RBP	3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	ADARB2	Q9NS39	739 aa	Known RBP	3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	NTM	Q9P121	344 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	VIPR1	P32241	457 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	BEX3	Q00994	111 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	PIN1	Q13526	163 aa	Predicted RBP	3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	FAM74A3	Q4VXF1	159 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	OR52W1	Q6IF63	320 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	DCUN1D4	Q92564	292 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	UPRT	Q96BW1	309 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	EXOSC3	Q9NQT5	275 aa	Known RBP	3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	FKBP11	Q9NYL4	201 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	ARL5C	A6NH57	179 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	TUSC3	Q13454	348 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	TARBP2	Q15633	366 aa	Known RBP	3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	AFMID	Q63HM1	303 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	GRINA	Q7Z429	371 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	SYS1	Q8N2H4	156 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	PSMG2	Q969U7	264 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	SLAMF9	Q96A28	289 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	CPPED1	Q9BRF8	314 aa	Predicted RBP	3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	ORAI3	Q9BRQ5	295 aa		3.96	□□□□□ -1.77
MACF1-231	ENST00000564288	C5orf52	A6NGY3	159 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	PPP6C	O00743	305 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	GABRG1	Q8N1C3	465 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	TCTEX1D1	Q8N7M0	179 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	OR2AK2	Q8NG84	335 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	A4GALT	Q9NPC4	353 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	BRINP1	O60477	761 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	TSPAN3	O60637	253 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	DUS4L	O95620	317 aa	Known RBP	3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	PDYN	P01213	254 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	FPR3	P25089	353 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	PLBD1	Q6P4A8	553 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	CASTOR1	Q8WTX7	329 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	SMIM4	Q8WVI0	70 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	SH3BGRL2	Q9UJC5	107 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	ZNF223	Q9UK11	482 aa	Predicted RBP	3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	POLR2H	P52434	150 aa	Known RBP	3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	P4HA3	Q7Z4N8	544 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	OR9A1P	Q8NGU1	263 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	MITD1	Q8WV92	249 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	C7orf34	Q96L11	122 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	GPER1	Q99527	375 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	LOC100289279	A0A1B0GTE1	492 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288		E5RGE8	158 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	EMC8	O43402	210 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	HLA-H	P01893	362 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	CD1A	P06126	327 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	MECP2	P51608	486 aa	Known RBP	3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	CHRFAM7A	Q494W8	412 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	FIGNL1	Q6PIW4	674 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	HSD17B11	Q8NBQ5	300 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	OR52I2	Q8NH67	350 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	FAM210B	Q96KR6	192 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	NSG2	Q9Y328	171 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	CLDN34	H7C241	214 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	SDHB	P21912	280 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	RNF151	Q2KHN1	245 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	MEST	Q5EB52	335 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	SLC38A5	Q8WUX1	472 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	HAS2	Q92819	552 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	ADAP2	Q9NPF8	381 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	RCE1	Q9Y256	329 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	CPSF4L	A6NMK7	179 aa	Known RBP	3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	C6orf47	O95873	294 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	CTSA	P10619	480 aa		3.96	□□□□□ -1.78
MACF1-231	ENST00000564288	FOLR2	P14207	255 aa		3.96	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms