RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 ZNF740Q8NDX6 193 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 OR5D16Q8NGK9 328 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 OR5W2Q8NH69 310 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 ZNF671Q8TAW3 534 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 EXOGQ9Y2C4 368 aaKnown RBP12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 DMRT1Q9Y5R6 373 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 A0A1W2PRQ8 180 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 OR6C76A6NM76 312 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 COLCA2A8K830 154 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 PYCARD-AS1I3L0S3 204 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 LATO43561 262 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 LILRB5O75023 590 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 CLN5O75503 358 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 PCCBP05166 539 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 HEXAP06865 529 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 ZNF44P15621 663 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 FCARP24071 287 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 SRSF3P84103 164 aaKnown RBP12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 ENTPD8Q5MY95 495 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 C1orf94Q6P1W5 598 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 BAIAP2L2Q6UXY1 529 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 ERN2Q76MJ5 926 aaKnown RBP12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 ZNF546Q86UE3 836 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 OR2AK2Q8NG84 335 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 SMAP2Q8WU79 429 aaPredicted RBP12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 RAB8BQ92930 207 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 ZNF354BQ96LW1 612 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 GAL3ST1Q99999 423 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 ALG8Q9BVK2 526 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 PINK1Q9BXM7 581 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 PRSS16Q9NQE7 514 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 SLC23A2Q9UGH3 650 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 SERGEFQ9UGK8 458 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 ACAD8Q9UKU7 415 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 PLEKHA6Q9Y2H5 1048 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 CARHSP1Q9Y2V2 147 aaKnown RBP12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 NPFFR2Q9Y5X5 522 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 IGLON5A6NGN9 336 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 SOCS6O14544 535 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 GPR37L1O60883 481 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 PCDH8O95206 1070 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 ATP1B1P05026 303 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 SERPIND1P05546 499 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 HTR2AP28223 471 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 TIA1P31483 386 aaKnown RBP eCLIP12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 RIDAP52758 137 aaKnown RBP12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 RPS13P62277 151 aaKnown RBP12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 ALKBH1Q13686 389 aaKnown RBP12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 TCEA2Q15560 299 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 RAB12Q6IQ22 244 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 TSSK4Q6SA08 328 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 SSX9Q7RTT3 188 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 LRRC56Q8IYG6 542 aaPredicted RBP12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 CMTM4Q8IZR5 234 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 PPCDCQ96CD2 204 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 ZC3H10Q96K80 434 aaKnown RBP12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 OR51I1Q9H343 314 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 ASH2LQ9UBL3 628 aa12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 ATXN7L1Q9ULK2 861 aaPredicted RBP12.93□□□□□ -0.34
GTF3C1-203ENST00000562609 ARGFXA6NJG6 315 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 OR2T1O43869 369 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 KRT33AO76009 404 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 NDUFB6O95139 128 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 KAT7O95251 611 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 TGFB1P01137 390 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 DCTDP32321 178 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 ACVR1BP36896 505 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 SEC13P55735 322 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 BDH1Q02338 343 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 KRT33BQ14525 404 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 LIPJQ5W064 366 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 OR13C5Q8NGS8 318 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 LGALS14Q8TCE9 139 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 MRPL38Q96DV4 380 aaKnown RBP12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 ZNF471Q9BX82 626 aaPredicted RBP12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 UCK1Q9HA47 277 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 TMEM138Q9NPI0 162 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 TRIM36Q9NQ86 728 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 ABRACLQ9P1F3 81 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 KLHL9Q9P2J3 617 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 NUP210Q8TEM1 1887 aaPredicted RBP12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 VEGFDO43915 354 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 STX11O75558 287 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 ACTL6AO96019 429 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 EPXP11678 715 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 NPPBP16860 134 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 ABCD3P28288 659 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 MAT2AP31153 395 aaKnown RBP12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 HCCSP53701 268 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 RUNX3Q13761 415 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 CSRP2Q16527 193 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 COMTD1Q86VU5 262 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 OR5AR1Q8NGP9 310 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 CXorf40AQ8TE69 158 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 TNFAIP8L1Q8WVP5 186 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 FGF14Q92915 247 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 TMEM231Q9H6L2 316 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 SFXN1Q9H9B4 322 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 MAN2C1Q9NTJ4 1040 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 C2orf42Q9NWW7 574 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms