RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 TMEM107Q6UX40 140 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 SLC39A5Q6ZMH5 540 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 CREB3L2Q70SY1 520 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 ERN2Q76MJ5 926 aaKnown RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 C6orf120Q7Z4R8 191 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 ZER1Q7Z7L7 766 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 IQCHQ86VS3 1027 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 C17orf64Q86WR6 236 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 LRRC28Q86X40 367 aaPredicted RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 MARCH9Q86YJ5 346 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 RBM45Q8IUH3 476 aaKnown RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 ZNF547Q8IVP9 402 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 GHDCQ8N2G8 530 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 C9orf62Q8N4C0 152 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 CELF5Q8N6W0 485 aaKnown RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 YIPF7Q8N8F6 280 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 ZNF740Q8NDX6 193 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 ATP6V1C2Q8NEY4 427 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 TTLQ8NG68 377 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 OR6T1Q8NGN1 323 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 OR2L2Q8NH16 312 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 OR52P1PQ8NH57 321 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 PIGXQ8TBF5 258 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 TEX47Q8TBZ9 253 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 RAET1EQ8TD07 263 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 HAVCR2Q8TDQ0 301 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 GNPDA2Q8TDQ7 276 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 DNAJA4Q8WW22 397 aaPredicted RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 ACOT11Q8WXI4 607 aaPredicted RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 ACOT12Q8WYK0 555 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 AKAP1Q92667 903 aaKnown RBP eCLIP2.26□□□□□ -2.05
SPG11-223ENST00000560858 RAB8BQ92930 207 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 UCN3Q969E3 161 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 RAD51AP1Q96B01 352 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 ARRDC3Q96B67 414 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 CREB3L1Q96BA8 519 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 MOAP1Q96BY2 351 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 AP2M1Q96CW1 435 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 NUS1Q96E22 293 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 RNFT2Q96EX2 444 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 SCMH1Q96GD3 660 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 SENP5Q96HI0 755 aaPredicted RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 DIRAS2Q96HU8 199 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 COX14Q96I36 57 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 GPR137Q96N19 417 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 GPA33Q99795 319 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 TREX2Q9BQ50 279 aaPredicted RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 AIF1LQ9BQI0 150 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 WFDC6Q9BQY6 131 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 TTYH2Q9BSA4 534 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 FNDC11Q9BVV2 318 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 SARGQ9BW04 601 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 SORBS1Q9BX66 1292 aaKnown RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 AICDAQ9GZX7 198 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 PCBD2Q9H0N5 130 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 ABCG4Q9H172 646 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 MMP28Q9H239 520 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 SLC38A1Q9H2H9 487 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 OR51I1Q9H343 314 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 FN3KQ9H479 309 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 GLIPR2Q9H4G4 154 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 EGLN3Q9H6Z9 239 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 DDX31Q9H8H2 851 aaKnown RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 TIGARQ9NQ88 270 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 SPHK2Q9NRA0 654 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 CYSLTR2Q9NS75 346 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 GIMAP4Q9NUV9 329 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 TEX10Q9NXF1 929 aaPredicted RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 GAR1Q9NY12 217 aaKnown RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 B3GNT2Q9NY97 397 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 MRPL39Q9NYK5 338 aaKnown RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 IL20Q9NYY1 176 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 AHSPQ9NZD4 102 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 EMC3Q9P0I2 261 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 SEC14L3Q9UDX4 400 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 IL36AQ9UHA7 158 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 NUFIP1Q9UHK0 495 aaKnown RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 TUBD1Q9UJT1 453 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 ELF5Q9UKW6 265 aaPredicted RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 GPR34Q9UPC5 381 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 CCL26Q9Y258 94 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 CARD8Q9Y2G2 431 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 GSTK1Q9Y2Q3 226 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 MRPS17Q9Y2R5 130 aaKnown RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 NPTNQ9Y639 398 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 ALG5Q9Y673 324 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 CDH10Q9Y6N8 788 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 EXPH5Q8NEV8 1989 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 ADAMTS9Q9P2N4 1935 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 PRRC2BQ5JSZ5 2229 aaKnown RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 SCN3AQ9NY46 2000 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 IGKV1-8A0A0C4DH67 115 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 TMEM272A0A1B0GTI8 110 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 A0A1B0GTQ1 180 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 RPS10-NUDT3A0A1W2PQS6 291 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 TUBAL3A6NHL2 446 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 ANKDD1BA6NHY2 528 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 OR6C70A6NIJ9 312 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 WASHC1A8K0Z3 465 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms