RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 KIRREL3Q8IZU9 778 aa11.42□□□□□ -0.58
TPM1-220ENST00000559556 TRIML2Q8N7C3 387 aa11.42□□□□□ -0.58
TPM1-220ENST00000559556 TMEM99Q8N816 258 aa11.42□□□□□ -0.58
TPM1-220ENST00000559556 FBXO17Q96EF6 278 aa11.42□□□□□ -0.58
TPM1-220ENST00000559556 ZNF385AQ96PM9 386 aaKnown RBP11.42□□□□□ -0.58
TPM1-220ENST00000559556 SORT1Q99523 831 aa11.42□□□□□ -0.58
TPM1-220ENST00000559556 PRR14Q9BWN1 585 aa11.42□□□□□ -0.58
TPM1-220ENST00000559556 C20orf27Q9GZN8 174 aa11.42□□□□□ -0.58
TPM1-220ENST00000559556 MTHFD2LQ9H903 347 aaPredicted RBP11.42□□□□□ -0.58
TPM1-220ENST00000559556 MYOZ1Q9NP98 299 aaPredicted RBP11.42□□□□□ -0.58
TPM1-220ENST00000559556 DSPPQ9NZW4 1301 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 IGHV1-18A0A0C4DH31 117 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 SLC35F4A4IF30 521 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 CDHR4A6H8M9 788 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 CCDC154A6NI56 674 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 PDE5AO76074 875 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 AKR7A3O95154 331 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 DBIP07108 87 aaKnown RBP11.41□□□□□ -0.58
TPM1-220ENST00000559556 ALDOCP09972 364 aaKnown RBP11.41□□□□□ -0.58
TPM1-220ENST00000559556 IL7RP16871 459 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 LBPP18428 481 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 PAX7P23759 505 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 S100A3P33764 101 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 RPL14P50914 215 aaKnown RBP11.41□□□□□ -0.58
TPM1-220ENST00000559556 P2RY4P51582 365 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 SNRPD2P62316 118 aaKnown RBP11.41□□□□□ -0.58
TPM1-220ENST00000559556 VSNL1P62760 191 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 CEACAM7Q14002 265 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 GGTLC2Q14390 218 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 GSTA3Q16772 222 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 C3orf36Q3SXR2 165 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 AAED1Q7RTV5 226 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 ARIH2OSQ8N7S6 290 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 MSI2Q96DH6 328 aaKnown RBP11.41□□□□□ -0.58
TPM1-220ENST00000559556 TEX37Q96LM6 180 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 ZNF317Q96PQ6 595 aaPredicted RBP11.41□□□□□ -0.58
TPM1-220ENST00000559556 SLC38A2Q96QD8 506 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 KATNB1Q9BVA0 655 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 TMEM109Q9BVC6 243 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 MEAF6Q9HAF1 191 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 KCNS2Q9ULS6 477 aa11.41□□□□□ -0.58
TPM1-220ENST00000559556 LOC390937A0A1W2PQ73 354 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 WDR91A4D1P6 747 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 FRS3O43559 492 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 CDH2P19022 906 aaPredicted RBP11.4□□□□□ -0.58
TPM1-220ENST00000559556 CXCR1P25024 350 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 ACAA2P42765 397 aaKnown RBP11.4□□□□□ -0.58
TPM1-220ENST00000559556 CDKN2CP42773 168 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 SLC1A6P48664 564 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 LRRC74AQ0VAA2 488 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 OR7A5Q15622 319 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 TBRG1Q3YBR2 411 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 COX20Q5RI15 118 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 FAM120AOSQ5T036 256 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 GPAT4Q86UL3 456 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 PEX5LQ8IYB4 626 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 OR1K1Q8NGR3 316 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 AENQ8WTP8 325 aaKnown RBP11.4□□□□□ -0.58
TPM1-220ENST00000559556 ALKBH3Q96Q83 286 aaPredicted RBP11.4□□□□□ -0.58
TPM1-220ENST00000559556 PANX1Q96RD7 426 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 KCNS3Q9BQ31 491 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 C19orf24Q9BVV8 132 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 NUF2Q9BZD4 464 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 CHODLQ9H9P2 273 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 SSU72Q9NP77 194 aaKnown RBP11.4□□□□□ -0.58
TPM1-220ENST00000559556 CA10Q9NS85 328 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 AIG1Q9NVV5 245 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 TMEM45AQ9NWC5 275 aa11.4□□□□□ -0.58
TPM1-220ENST00000559556 CRNNQ9UBG3 495 aaPredicted RBP11.4□□□□□ -0.58
TPM1-220ENST00000559556 ARPC4-TTLL3A0A0A6YYG9 625 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 IGHV4-61A0A0C4DH41 118 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 LOC100289279A0A1B0GTE1 492 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 OR6C65A6NJZ3 312 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 B9A039 149 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 ZNF587BE7ETH6 402 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 KLF11O14901 512 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 TM9SF1O15321 606 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 NPIPB7O75200 414 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 VAMP5O95183 116 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 IGLV1-44P01699 117 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 CRYAAP02489 173 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 PGRP06401 933 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 GKN3PP0CG01 181 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 NR2F1P10589 423 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 APEHP13798 732 aaKnown RBP11.39□□□□□ -0.59
TPM1-220ENST00000559556 HNF1AP20823 631 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 IL12AP29459 219 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 SERPINF1P36955 418 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 SELENOPP49908 381 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 PPOXP50336 477 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 UFM1P61960 85 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 LGALS3BPQ08380 585 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 MAPK11Q15759 364 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 EFNB3Q15768 340 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 ADIPOQQ15848 244 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 RNF220Q5VTB9 566 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 WBP2NLQ6ICG8 309 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 ZNF836Q6ZNA1 936 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 IL17RELQ6ZVW7 336 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 CREB3L2Q70SY1 520 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms