RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 IGHV7-81A0A0B4J1V7 117 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 A0A0U1RQS6 177 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 FAM240BA0A1B0GVZ2 78 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 A0A1W2PNU3 283 aaPredicted RBP1.19□□□□□ -2.22
USP3-209ENST00000558925 FAM168BA1KXE4 195 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 HEATR9A2RTY3 570 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 A6NIZ1 184 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 PCP4L1A6NKN8 68 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 ZFP92A6NM28 416 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 H0Y8G0 127 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 HIP1O00291 1037 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 EIF3HO15372 352 aaKnown RBP eCLIP1.19□□□□□ -2.22
USP3-209ENST00000558925 RNF13O43567 381 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 UGT1A9O60656 530 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 TOM1O60784 492 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 TBL1XO60907 577 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 OR7A10O76100 309 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 C1orf105O95561 183 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 TMEM50AO95807 157 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 TIMP1P01033 207 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 IGHV3-48P01763 117 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 HSPB1P04792 205 aaKnown RBP1.19□□□□□ -2.22
USP3-209ENST00000558925 P0C879 139 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 PPIAL4FP0DN26 164 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 RNH1P13489 461 aaKnown RBP1.19□□□□□ -2.22
USP3-209ENST00000558925 GCFC2P16383 781 aaKnown RBP1.19□□□□□ -2.22
USP3-209ENST00000558925 KLK2P20151 261 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 ZP3P21754 424 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 ZBTB25P24278 435 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 ANXA13P27216 316 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 NMT1P30419 496 aaKnown RBP1.19□□□□□ -2.22
USP3-209ENST00000558925 CALCRP30988 508 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 PRKAR2BP31323 418 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 CASP14P31944 242 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 BTCP35070 178 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 FDFT1P37268 417 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 DDOSTP39656 456 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 OPRD1P41143 372 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 ATP5OP48047 213 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 RPL34P49207 117 aaKnown RBP1.19□□□□□ -2.22
USP3-209ENST00000558925 SLC26A2P50443 739 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 CAV2P51636 162 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 DIO3P55073 304 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 CDH4P55283 916 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 KRTAP12-2P59991 146 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 RAP1BP61224 184 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 TGFBR3Q03167 851 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 REG3AQ06141 175 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 ZNF763Q0D2J5 394 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 SLC10A7Q0GE19 358 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 CCDC173Q0VFZ6 552 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 ZNF77Q15935 545 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 MRPL23Q16540 153 aaKnown RBP1.19□□□□□ -2.22
USP3-209ENST00000558925 ZNF239Q16600 458 aaKnown RBP1.19□□□□□ -2.22
USP3-209ENST00000558925 LRRC36Q1X8D7 754 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 MICBQ29980 383 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 PAGE2BQ5JRK9 111 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 KLF17Q5JT82 389 aaPredicted RBP1.19□□□□□ -2.22
USP3-209ENST00000558925 C9orf129Q5T035 196 aaKnown RBP1.19□□□□□ -2.22
USP3-209ENST00000558925 UTF1Q5T230 341 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 C1orf185Q5T7R7 199 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 ARMC12Q5T9G4 340 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 ZNF658Q5TYW1 1059 aaPredicted RBP1.19□□□□□ -2.22
USP3-209ENST00000558925 LRRC66Q68CR7 880 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 C1orf94Q6P1W5 598 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 LRRC31Q6UY01 552 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 RFLNAQ6ZTI6 216 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 MOB1BQ7L9L4 216 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 ARCQ7LC44 396 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 PRSS41Q7RTY9 318 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 NANOGNBQ7Z5D8 188 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 TGIF2LYQ8IUE0 185 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 PRR22Q8IZ63 422 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 OFCC1Q8IZS5 231 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 RDH10Q8IZV5 341 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 SLC39A11Q8N1S5 342 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 CADM2Q8N3J6 435 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 FBXL16Q8N461 479 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 C11orf42Q8N5U0 333 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 ZNF525Q8N782 197 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 TPRX1Q8N7U7 411 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 SLC2A14Q8TDB8 520 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 BRSK1Q8TDC3 778 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 SETD7Q8WTS6 366 aaKnown RBP1.19□□□□□ -2.22
USP3-209ENST00000558925 HTR3CQ8WXA8 447 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 MRPS31Q92665 395 aaKnown RBP1.19□□□□□ -2.22
USP3-209ENST00000558925 ANKRD9Q96BM1 317 aaPredicted RBP1.19□□□□□ -2.22
USP3-209ENST00000558925 RASD2Q96D21 266 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 SERAC1Q96JX3 654 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 MS4A4EQ96PG1 132 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 TECTBQ96PL2 329 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 MBOAT4Q96T53 435 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 TSG101Q99816 390 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 CNPY3Q9BT09 278 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 RAB34Q9BZG1 259 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 FAM192AQ9GZU8 254 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 SLITRK2Q9H156 845 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 NEUROG2Q9H2A3 272 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 OR51J1Q9H342 316 aa1.19□□□□□ -2.22
USP3-209ENST00000558925 SMYD3Q9H7B4 428 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms