RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 CNEP1R1Q8N9A8 125 aa18.36■□□□□ 0.53
FOXN3-209ENST00000555353 RELL2Q8NC24 303 aaPredicted RBP18.36■□□□□ 0.53
FOXN3-209ENST00000555353 OR2T29Q8NH02 315 aa18.36■□□□□ 0.53
FOXN3-209ENST00000555353 DDIT4LQ96D03 193 aa18.36■□□□□ 0.53
FOXN3-209ENST00000555353 LRRC46Q96FV0 321 aa18.36■□□□□ 0.53
FOXN3-209ENST00000555353 BDH2Q9BUT1 245 aa18.36■□□□□ 0.53
FOXN3-209ENST00000555353 SRXN1Q9BYN0 137 aa18.36■□□□□ 0.53
FOXN3-209ENST00000555353 ADGRG4Q8IZF6 3080 aa18.36■□□□□ 0.53
FOXN3-209ENST00000555353 A0A1W2PNV4 684 aa18.35■□□□□ 0.53
FOXN3-209ENST00000555353 CPSF4LA6NMK7 179 aaKnown RBP18.35■□□□□ 0.53
FOXN3-209ENST00000555353 EEF1E1-BLOC1S5C9J1V9 151 aa18.35■□□□□ 0.53
FOXN3-209ENST00000555353 CLOCKO15516 846 aa18.35■□□□□ 0.53
FOXN3-209ENST00000555353 EEF1E1O43324 174 aaKnown RBP18.35■□□□□ 0.53
FOXN3-209ENST00000555353 ZNF208O43345 1280 aa18.35■□□□□ 0.53
FOXN3-209ENST00000555353 OR5F1O95221 314 aa18.35■□□□□ 0.53
FOXN3-209ENST00000555353 CLK1P49759 484 aaKnown RBP18.35■□□□□ 0.53
FOXN3-209ENST00000555353 RAC3P60763 192 aa18.35■□□□□ 0.53
FOXN3-209ENST00000555353 CSNK2A1P68400 391 aaPredicted RBP18.35■□□□□ 0.53
FOXN3-209ENST00000555353 ST3GAL3Q11203 375 aa18.35■□□□□ 0.53
FOXN3-209ENST00000555353 OR1Q1Q15612 314 aa18.35■□□□□ 0.53
FOXN3-209ENST00000555353 ATP6AP1Q15904 470 aa18.35■□□□□ 0.53
FOXN3-209ENST00000555353 GTF2IRD2BQ6EKJ0 949 aa18.35■□□□□ 0.53
FOXN3-209ENST00000555353 ZNF613Q6PF04 617 aa18.35■□□□□ 0.53
FOXN3-209ENST00000555353 GTF2IRD2Q86UP8 949 aa18.35■□□□□ 0.53
FOXN3-209ENST00000555353 MCEMP1Q8IX19 187 aa18.35■□□□□ 0.53
FOXN3-209ENST00000555353 ADAMTS16Q8TE57 1224 aa18.35■□□□□ 0.53
FOXN3-209ENST00000555353 OR11A1Q9GZK7 315 aa18.35■□□□□ 0.53
FOXN3-209ENST00000555353 REEP1Q9H902 201 aa18.35■□□□□ 0.53
FOXN3-209ENST00000555353 C6orf203Q9P0P8 240 aaPredicted RBP18.35■□□□□ 0.53
FOXN3-209ENST00000555353 PKDREJQ9NTG1 2253 aa18.35■□□□□ 0.53
FOXN3-209ENST00000555353 TRAPPC13A5PLN9 417 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 C19orf84I3L1E1 186 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 SULT2B1O00204 365 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 DIRAS1O95057 198 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 THRBP10828 461 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 DIO1P49895 249 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 ASCL1P50553 236 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 SPIBQ01892 262 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 TFF3Q07654 80 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 PIN1Q13526 163 aaPredicted RBP18.34■□□□□ 0.53
FOXN3-209ENST00000555353 IQCCQ4KMZ1 466 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 TMPPEQ6ZT21 453 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 PQLC1Q8N2U9 271 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 DNAJA4Q8WW22 397 aaPredicted RBP18.34■□□□□ 0.53
FOXN3-209ENST00000555353 LRTOMTQ8WZ04 291 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 ROBO4Q8WZ75 1007 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 RNPEPL1Q9HAU8 725 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 STX18Q9P2W9 335 aaKnown RBP18.34■□□□□ 0.53
FOXN3-209ENST00000555353 HDGFL3Q9Y3E1 203 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 TMEM72A0PK05 275 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 J3KTA2 159 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 TPST2O60704 377 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 H1F0P07305 194 aaKnown RBP18.34■□□□□ 0.53
FOXN3-209ENST00000555353 ANPEPP15144 967 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 SIRPAP78324 504 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 MYBPHQ13203 477 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 GK3PQ14409 553 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 FCRLAQ7L513 359 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 TSEN54Q7Z6J9 526 aaKnown RBP18.34■□□□□ 0.53
FOXN3-209ENST00000555353 OFCC1Q8IZS5 231 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 CENPNQ96H22 339 aaPredicted RBP18.34■□□□□ 0.53
FOXN3-209ENST00000555353 GMPPAQ96IJ6 420 aaPredicted RBP18.34■□□□□ 0.53
FOXN3-209ENST00000555353 ARL5BQ96KC2 179 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 PIGMQ9H3S5 423 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 GLRX2Q9NS18 164 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 RIMS3Q9UJD0 308 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 A4GNTQ9UNA3 340 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 TESMINQ9Y4I5 508 aa18.34■□□□□ 0.53
FOXN3-209ENST00000555353 E2F6O75461 281 aa18.33■□□□□ 0.52
FOXN3-209ENST00000555353 TNFSF13O75888 250 aa18.33■□□□□ 0.52
FOXN3-209ENST00000555353 GADD45GO95257 159 aa18.33■□□□□ 0.52
FOXN3-209ENST00000555353 ENPP1P22413 925 aa18.33■□□□□ 0.52
FOXN3-209ENST00000555353 HTR2AP28223 471 aa18.33■□□□□ 0.52
FOXN3-209ENST00000555353 RRM2P31350 389 aa18.33■□□□□ 0.52
FOXN3-209ENST00000555353 ARHGDIAP52565 204 aa18.33■□□□□ 0.52
FOXN3-209ENST00000555353 CTBP2P56545 445 aa18.33■□□□□ 0.52
FOXN3-209ENST00000555353 RNPS1Q15287 305 aaKnown RBP18.33■□□□□ 0.52
FOXN3-209ENST00000555353 SWT1Q5T5J6 900 aaKnown RBP18.33■□□□□ 0.52
FOXN3-209ENST00000555353 ULK3Q6PHR2 472 aa18.33■□□□□ 0.52
FOXN3-209ENST00000555353 PIK3C3Q8NEB9 887 aa18.33■□□□□ 0.52
FOXN3-209ENST00000555353 RNF217Q8TC41 542 aa18.33■□□□□ 0.52
FOXN3-209ENST00000555353 RNF128Q8TEB7 428 aa18.33■□□□□ 0.52
FOXN3-209ENST00000555353 C3orf49Q96BT1 292 aa18.33■□□□□ 0.52
FOXN3-209ENST00000555353 ZHX1-C8orf76Q96EF9 292 aa18.33■□□□□ 0.52
FOXN3-209ENST00000555353 DNAJA3Q96EY1 480 aa18.33■□□□□ 0.52
FOXN3-209ENST00000555353 SLC41A3Q96GZ6 507 aa18.33■□□□□ 0.52
FOXN3-209ENST00000555353 PRR14Q9BWN1 585 aa18.33■□□□□ 0.52
FOXN3-209ENST00000555353 ANKRD19PQ9H560 264 aa18.33■□□□□ 0.52
FOXN3-209ENST00000555353 EMC9Q9Y3B6 208 aa18.33■□□□□ 0.52
FOXN3-209ENST00000555353 SETXQ7Z333 2677 aaKnown RBP18.32■□□□□ 0.52
FOXN3-209ENST00000555353 A0A1B0GWA3 101 aa18.32■□□□□ 0.52
FOXN3-209ENST00000555353 SMNDC1O75940 238 aaKnown RBP eCLIP18.32■□□□□ 0.52
FOXN3-209ENST00000555353 ATP6V1G2O95670 118 aa18.32■□□□□ 0.52
FOXN3-209ENST00000555353 PMS2P2O95744 297 aa18.32■□□□□ 0.52
FOXN3-209ENST00000555353 KIR2DL2P43627 348 aaPredicted RBP18.32■□□□□ 0.52
FOXN3-209ENST00000555353 CDH12P55289 794 aa18.32■□□□□ 0.52
FOXN3-209ENST00000555353 TRAM2Q15035 370 aa18.32■□□□□ 0.52
FOXN3-209ENST00000555353 ALG10BQ5I7T1 473 aa18.32■□□□□ 0.52
FOXN3-209ENST00000555353 FAM214BQ7L5A3 538 aa18.32■□□□□ 0.52
FOXN3-209ENST00000555353 SLC43A2Q8N370 569 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms