RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 INO80EQ8NBZ0 244 aaPredicted RBP11.27□□□□□ -0.6
NR4A1-215ENST00000550557 APOBEC4Q8WW27 367 aaKnown RBP11.27□□□□□ -0.6
NR4A1-215ENST00000550557 ZNF845Q96IR2 970 aaPredicted RBP11.27□□□□□ -0.6
NR4A1-215ENST00000550557 SLC19A3Q9BZV2 496 aa11.27□□□□□ -0.6
NR4A1-215ENST00000550557 SLC6A15Q9H2J7 730 aa11.27□□□□□ -0.6
NR4A1-215ENST00000550557 AGAP5A6NIR3 686 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 MAGEA2P43356 314 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 HNRNPA0Q13151 305 aaKnown RBP11.27□□□□□ -0.61
NR4A1-215ENST00000550557 RSU1Q15404 277 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 TRAM1Q15629 374 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 SLC36A2Q495M3 483 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 TBPL2Q6SJ96 375 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 C3P1Q6ZMU1 363 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 SNX29P2Q8IUI4 249 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 ZNF300Q96RE9 604 aaPredicted RBP11.27□□□□□ -0.61
NR4A1-215ENST00000550557 DNTTIP1Q9H147 329 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 ERVK13-1Q9NX77 482 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 LOC285556D6RIA3 1793 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 ASCC3Q8N3C0 2202 aaKnown RBP11.27□□□□□ -0.61
NR4A1-215ENST00000550557 OR6C76A6NM76 312 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 FGF17O60258 216 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 OR2J2O76002 312 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 TSPAN12O95859 305 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 IHHQ14623 411 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 MFSD12Q6NUT3 480 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 OR11L1Q8NGX0 322 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 ACOT13Q9NPJ3 140 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 ABCG2Q9UNQ0 655 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 ASB1Q9Y576 335 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 CORINQ9Y5Q5 1042 aa11.27□□□□□ -0.61
NR4A1-215ENST00000550557 NOTOA8MTQ0 251 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 C12orf71A8MTZ7 269 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 DVL2O14641 736 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 SLC19A2O60779 497 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 CKMT1AP12532 417 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 HSD17B12Q53GQ0 312 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 ZNF813Q6ZN06 617 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 FAM217AQ8IXS0 508 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 PROCRQ9UNN8 238 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 SLC6A5Q9Y345 797 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 DOCK3Q8IZD9 2030 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 PMS2P1A4D2B8 440 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 OTOL1A6NHN0 477 aaPredicted RBP11.26□□□□□ -0.61
NR4A1-215ENST00000550557 TRIM23P36406 574 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 HTR5AP47898 357 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 MAP4K2Q12851 820 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 EIF4EBP2Q13542 120 aaPredicted RBP11.26□□□□□ -0.61
NR4A1-215ENST00000550557 DLEU7Q6UYE1 221 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 PIAS4Q8N2W9 510 aaPredicted RBP11.26□□□□□ -0.61
NR4A1-215ENST00000550557 OR11G2Q8NGC1 345 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 OR8J2Q8NGG1 315 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 GCDHQ92947 438 aaPredicted RBP11.26□□□□□ -0.61
NR4A1-215ENST00000550557 SGPP1Q9BX95 441 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 RABL2AQ9UBK7 228 aaPredicted RBP11.26□□□□□ -0.61
NR4A1-215ENST00000550557 KCNS2Q9ULS6 477 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 RABL2BQ9UNT1 228 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 FXYD1O00168 92 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 LCMT2O60294 686 aaKnown RBP11.26□□□□□ -0.61
NR4A1-215ENST00000550557 ACTL6BO94805 426 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 FRMPD2BQ6IN97 320 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 CA13Q8N1Q1 262 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 SLC16A11Q8NCK7 471 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 SDR9C7Q8NEX9 313 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 LRRC3BQ96PB8 259 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 C12orf4Q9NQ89 552 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 CTSFQ9UBX1 484 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 MLXQ9UH92 298 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 GPR52Q9Y2T5 361 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 F13BP05160 661 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 TRMT12Q53H54 448 aaKnown RBP11.26□□□□□ -0.61
NR4A1-215ENST00000550557 S1PR5Q9H228 398 aa11.26□□□□□ -0.61
NR4A1-215ENST00000550557 NMNAT1Q9HAN9 279 aaPredicted RBP11.26□□□□□ -0.61
NR4A1-215ENST00000550557 NOP16Q9Y3C1 178 aaKnown RBP11.26□□□□□ -0.61
NR4A1-215ENST00000550557 OR2AT4A6NND4 320 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 TIMM8AO60220 97 aaPredicted RBP11.25□□□□□ -0.61
NR4A1-215ENST00000550557 EIF4E2O60573 245 aaKnown RBP11.25□□□□□ -0.61
NR4A1-215ENST00000550557 FUCA1P04066 466 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 ARAFP10398 606 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 OSMP13725 252 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 FOLR1P15328 257 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 HNRNPFP52597 415 aaKnown RBP11.25□□□□□ -0.61
NR4A1-215ENST00000550557 PRAMEF17Q5VTA0 474 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 CBLL1Q75N03 491 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 LAS2Q8IYD9 372 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 ZMYND19Q96E35 227 aaPredicted RBP11.25□□□□□ -0.61
NR4A1-215ENST00000550557 ZNF701Q9NV72 531 aaPredicted RBP11.25□□□□□ -0.61
NR4A1-215ENST00000550557 PLA2G3Q9NZ20 509 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 NUFIP1Q9UHK0 495 aaKnown RBP11.25□□□□□ -0.61
NR4A1-215ENST00000550557 IGHV5-51A0A0C4DH38 117 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 SURF4O15260 269 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 SFTPCP11686 197 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 CHRNB4P30926 498 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 PPICP45877 212 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 C4orf46Q504U0 113 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 LIPKQ5VXJ0 399 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 SLC25A25Q6KCM7 469 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 CPOQ8IVL8 374 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 LRRC18Q8N456 261 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 SLC37A3Q8NCC5 494 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 FGF11Q92914 225 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms