RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 PPIBP23284 216 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 HTR2AP28223 471 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 PRKAR1BP31321 381 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 COPZ1P61923 177 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 CDK6Q00534 326 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 FAPQ12884 760 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 CAPRIN1Q14444 709 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 OR7A5Q15622 319 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 STK11Q15831 433 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 PGGHGQ32M88 737 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ZNF672Q499Z4 452 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 GLIPR1L2Q4G1C9 344 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 OTUD3Q5T2D3 398 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 GCNT6Q5T4J0 391 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 TSPO2Q5TGU0 170 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 C1orf140Q5VVS0 124 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 REEP3Q6NUK4 255 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 DHRS4L2Q6PKH6 230 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 C6orf89Q6UWU4 347 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 YTHDF3Q7Z739 585 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 RETREG3Q86VR2 466 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 P3H2Q8IVL5 708 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 WDR31Q8NA23 367 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 KBTBD8Q8NFY9 601 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 OR9K2Q8NGE7 335 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 OR52E4Q8NGH9 312 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 STK35Q8TDR2 534 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 PERPQ96FX8 193 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 COX4I2Q96KJ9 171 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ZNF385AQ96PM9 386 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 CPPED1Q9BRF8 314 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 SF3B5Q9BWJ5 86 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 PRR14Q9BWN1 585 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 PIF1Q9H611 641 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 SLC7A10Q9NS82 523 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 PARPBPQ9NWS1 579 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ASB6Q9NWX5 421 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 TAS2R16Q9NYV7 291 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 SLC9A8Q9Y2E8 581 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 SVEP1Q4LDE5 3571 aa11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 HEATR1Q9H583 2144 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-215ENST00000543359 C5orf58C9J3I9 102 aa11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 CLOCKO15516 846 aa11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 TPST2O60704 377 aa11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 RAD51DO75771 328 aa11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 CD8AP01732 235 aa11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 INHBBP09529 407 aa11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 NCF2P19878 526 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 SELPLGQ14242 412 aa11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 SSX8Q7RTT4 187 aa11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 BIVMQ86UB2 503 aa11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 PTOV1Q86YD1 416 aa11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 EPHX4Q8IUS5 362 aa11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 UBE2J2Q8N2K1 259 aa11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 LSMEM1Q8N8F7 131 aa11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 TMEM171Q8WVE6 324 aa11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 MUCL1Q96DR8 90 aa11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 POM121Q96HA1 1249 aa11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 Q96MF0 132 aa11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 ARMC7Q9H6L4 198 aa11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 C12orf10Q9HB07 376 aa11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 DCTN4Q9UJW0 460 aa11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 LAMP3Q9UQV4 416 aa11.52□□□□□ -0.57
TNFRSF1A-215ENST00000543359 DNHD1Q96M86 4753 aa11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 IGKV1D-42A0A075B6H8 117 aa11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 A0A1B0GWA3 101 aa11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 TRIM64A6NGJ6 449 aa11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 TRIM64BA6NI03 449 aa11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 PCBP3P57721 371 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 SLC25A3Q00325 362 aa11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 DMTNQ08495 405 aa11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 SCARB2Q14108 478 aa11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 OR7E24Q6IFN5 339 aa11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 CASP12Q6UXS9 341 aa11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 CREB3L2Q70SY1 520 aa11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 MFSD8Q8NHS3 518 aa11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 SMAP2Q8WU79 429 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 TAAR8Q969N4 342 aa11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 KTI12Q96EK9 354 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 BOD1Q96IK1 185 aa11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 ANKRD27Q96NW4 1050 aa11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 CGREF1Q99674 301 aa11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 RABEP2Q9H5N1 569 aa11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 ARGLU1Q9NWB6 273 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 ADPRHL2Q9NX46 363 aa11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 SONP18583 2426 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1A-215ENST00000543359 HIVEP2P31629 2446 aa11.5□□□□□ -0.57
TNFRSF1A-215ENST00000543359 A0A1W2PR80 420 aa11.5□□□□□ -0.57
TNFRSF1A-215ENST00000543359 CIB4A0PJX0 185 aa11.5□□□□□ -0.57
TNFRSF1A-215ENST00000543359 H7C1Q1 480 aa11.5□□□□□ -0.57
TNFRSF1A-215ENST00000543359 ZNF432O94892 652 aa11.5□□□□□ -0.57
TNFRSF1A-215ENST00000543359 MFN2O95140 757 aa11.5□□□□□ -0.57
TNFRSF1A-215ENST00000543359 VAMP5O95183 116 aa11.5□□□□□ -0.57
TNFRSF1A-215ENST00000543359 SLC6A2P23975 617 aa11.5□□□□□ -0.57
TNFRSF1A-215ENST00000543359 MPGP29372 298 aa11.5□□□□□ -0.57
TNFRSF1A-215ENST00000543359 LGALS3BPQ08380 585 aa11.5□□□□□ -0.57
TNFRSF1A-215ENST00000543359 KRTAP21-3Q3LHN1 58 aa11.5□□□□□ -0.57
TNFRSF1A-215ENST00000543359 LINGO2Q7L985 606 aa11.5□□□□□ -0.57
TNFRSF1A-215ENST00000543359 C1orf162Q8NEQ5 155 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF1A-215ENST00000543359 OR52N5Q8NH56 324 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms