RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 TOX3O15405 576 aaPredicted RBP10.75□□□□□ -0.69
USF1-208ENST00000528768 RGS5O15539 181 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 IDH3BO43837 385 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 CDRT1O95170 752 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 IL33O95760 270 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 MT-ND5P03915 603 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 CTSBP07858 339 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 MSL3P1P0C860 447 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 LIMS3P0CW19 117 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 LIMS4P0CW20 117 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 CT45A8P0DMV1 189 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 CT45A9P0DMV2 189 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 WT1P19544 449 aaPredicted RBP10.75□□□□□ -0.69
USF1-208ENST00000528768 CFL1P23528 166 aaKnown RBP10.75□□□□□ -0.69
USF1-208ENST00000528768 RPS19P39019 145 aaKnown RBP10.75□□□□□ -0.69
USF1-208ENST00000528768 OR1D5P58170 312 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 PRPS1P60891 318 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 CCL7P80098 99 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 CRYZQ08257 329 aaKnown RBP10.75□□□□□ -0.69
USF1-208ENST00000528768 CLPPQ16740 277 aaPredicted RBP10.75□□□□□ -0.69
USF1-208ENST00000528768 KLHL12Q53G59 568 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 CT45A2Q5DJT8 189 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 MZT2AQ6P582 158 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 WDR74Q6RFH5 385 aaPredicted RBP10.75□□□□□ -0.69
USF1-208ENST00000528768 PAQR6Q6TCH4 344 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 NPSR1Q6W5P4 371 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 WDR88Q6ZMY6 472 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 ZAR1Q86SH2 424 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 LHFPL3Q86UP9 236 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 D2HGDHQ8N465 521 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 PARP16Q8N5Y8 322 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 METTL27Q8N6F8 245 aaPredicted RBP10.75□□□□□ -0.69
USF1-208ENST00000528768 ATP6V1C2Q8NEY4 427 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 OR51G2Q8NGK0 314 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 OR13C2Q8NGS9 318 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 OR14A16Q8NHC5 309 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 SSC4DQ8WTU2 575 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 SLC25A46Q96AG3 418 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 SENP5Q96HI0 755 aaPredicted RBP10.75□□□□□ -0.69
USF1-208ENST00000528768 LCORQ96JN0 433 aaPredicted RBP10.75□□□□□ -0.69
USF1-208ENST00000528768 DPYSL5Q9BPU6 564 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 KCNS3Q9BQ31 491 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 ZNF426Q9BUY5 554 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 SLC7A5P2Q9GIP4 190 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 ATP13A2Q9NQ11 1180 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 TRIM36Q9NQ86 728 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 ABCB10Q9NRK6 738 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 RHBDL2Q9NX52 303 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 FLRT3Q9NZU0 649 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 FOXJ2Q9P0K8 574 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 SEMA5BQ9P283 1151 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 COPS7AQ9UBW8 275 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 ZNF229Q9UJW7 825 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 SRPK3Q9UPE1 567 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 POLHQ9Y253 713 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 SLC6A5Q9Y345 797 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 ZNF337Q9Y3M9 751 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 CMAHPQ9Y471 501 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 MN1Q10571 1320 aaPredicted RBP10.75□□□□□ -0.69
USF1-208ENST00000528768 A0A087WUJ7 227 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 A0A1W2PQM1 296 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 FUOMA2VDF0 154 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 ELOA3DA6NLF2 546 aaPredicted RBP10.74□□□□□ -0.69
USF1-208ENST00000528768 OR6C76A6NM76 312 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 C9orf172C9J069 976 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 TGFBR3LH3BV60 316 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 MAGEB3O15480 346 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 DDAH2O95865 285 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 PTTG1O95997 202 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 IGKV1D-16P01601 117 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 ZGLP1P0C6A0 271 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 UBL4AP11441 157 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 TBXA2RP21731 343 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 F8A1P23610 371 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 SEPHS1P49903 392 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 SLC16A1P53985 500 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 ACY1Q03154 408 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 CDC20Q12834 499 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 ELOA3BQ3SY89 546 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 KLHL26Q53HC5 615 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 SLC35F1Q5T1Q4 408 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 DDI2Q5TDH0 399 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 OR2G6Q5TZ20 316 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 NKAIN2Q5VXU1 208 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 ZNF322Q6U7Q0 402 aaPredicted RBP10.74□□□□□ -0.69
USF1-208ENST00000528768 LINC00114Q6XXX2 140 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 DPY19L2P2Q6ZN68 376 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 SLC29A4Q7RTT9 530 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 CCDC190Q86UF4 302 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 IL22RA1Q8N6P7 574 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 FAM98AQ8NCA5 519 aaKnown RBP10.74□□□□□ -0.69
USF1-208ENST00000528768 GALNT11Q8NCW6 608 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 ELOA3Q8NG57 546 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 OR4F15Q8NGB8 312 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 OR4N2Q8NGD1 307 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 OR51A7Q8NH64 312 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 SPRYD4Q8WW59 207 aaPredicted RBP10.74□□□□□ -0.69
USF1-208ENST00000528768 NKD1Q969G9 470 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 SLC41A2Q96JW4 573 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 WDFY2Q96P53 400 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms