RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 MAOAP21397 527 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 PRDX6P30041 224 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 NTSP30990 170 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 OTX2P32243 289 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 ZFP36L2P47974 494 aaKnown RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 MNAT1P51948 309 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 NCBP2P52298 156 aaKnown RBP eCLIP4.07□□□□□ -1.76
USP48-211ENST00000526044 OR4D2P58180 307 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 IGLV3-21P80748 117 aaPredicted RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 GABPB1Q06547 395 aaPredicted RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 COX10Q12887 443 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 ART3Q13508 389 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 KEAP1Q14145 624 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 RCAN2Q14206 197 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 TGIF1Q15583 401 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 GPR68Q15743 365 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 CEBPEQ15744 281 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 VPS26BQ4G0F5 336 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 ZNF766Q5HY98 468 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 C6orf163Q5TEZ5 329 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 FAM91A1Q658Y4 838 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 TRAT1Q6PIZ9 186 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 FIP1L1Q6UN15 594 aaKnown RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 TMEM205Q6UW68 189 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 ZNF621Q6ZSS3 439 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 MSANTD1Q6ZTZ1 278 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 CPEB2Q7Z5Q1 589 aaKnown RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 CAMKMTQ7Z624 323 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 TBC1D26Q86UD7 250 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 FJX1Q86VR8 437 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 ANKRD46Q86W74 232 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 ST13P4Q8IZP2 240 aaPredicted RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 LRRC25Q8N386 305 aaPredicted RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 OR2Y1Q8NGV0 311 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 RIT1Q92963 219 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 CIDECQ96AQ7 238 aaPredicted RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 KIAA1143Q96AT1 154 aaPredicted RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 PPWD1Q96BP3 646 aaKnown RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 ELP4Q96EB1 424 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 ZBED6CLQ96FA7 236 aaPredicted RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 SLC45A3Q96JT2 553 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 AMDHD1Q96NU7 426 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 PANX1Q96RD7 426 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 ATP6V0BQ99437 205 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 PELOQ9BRX2 385 aaKnown RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 VN1R1Q9GZP7 353 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 SLC25A18Q9H1K4 315 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 GLIPR2Q9H4G4 154 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 GPN2Q9H9Y4 310 aaPredicted RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 C3orf14Q9HBI5 128 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 SLC52A3Q9NQ40 469 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 PCDHB16Q9NRJ7 776 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 PNO1Q9NRX1 252 aaKnown RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 ACSS1Q9NUB1 689 aaPredicted RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 BEX4Q9NWD9 120 aaPredicted RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 GID8Q9NWU2 228 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 FAM120CQ9NX05 1096 aaKnown RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 TAS2R9Q9NYW1 312 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 C19orf25Q9UFG5 118 aaPredicted RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 BTNL2Q9UIR0 455 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 LEF1Q9UJU2 399 aaPredicted RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 ANGPTL2Q9UKU9 493 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 PAM16Q9Y3D7 125 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 CLCA3PQ9Y6N3 262 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 EP300Q09472 2414 aaPredicted RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 FAM186AA6NE01 2351 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 KNTC1P50748 2209 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 PTPRZ1P23471 2315 aaPredicted RBP4.06□□□□□ -1.76
USP48-211ENST00000526044 FER1L5A0AVI2 2057 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 NUP214P35658 2090 aaPredicted RBP4.06□□□□□ -1.76
USP48-211ENST00000526044 A0A096LPI6 279 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 IGKV3D-11A0A0A0MRZ8 115 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 IGHV3-20A0A0C4DH32 117 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 GAGE10A6NGK3 116 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 BBIP1A8MTZ0 92 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 C17orf105B2RV13 164 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 FBP2O00757 339 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 ACOT8O14734 319 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 EMC8O43402 210 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 CREG1O75629 220 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 BCAS2O75934 225 aaPredicted RBP4.06□□□□□ -1.76
USP48-211ENST00000526044 ATP1B1P05026 303 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 UMODP07911 640 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 KRT16P08779 473 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 FCGR1AP12314 374 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 ICAM2P13598 275 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 LIFP15018 202 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 SRD5A1P18405 259 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 EFNA1P20827 205 aaPredicted RBP4.06□□□□□ -1.76
USP48-211ENST00000526044 CALB2P22676 271 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 UQCRC2P22695 453 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 F8A1P23610 371 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 MMP11P24347 488 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 C21orf33P30042 268 aaPredicted RBP4.06□□□□□ -1.76
USP48-211ENST00000526044 FRKP42685 505 aaPredicted RBP4.06□□□□□ -1.76
USP48-211ENST00000526044 CCT3P49368 545 aaKnown RBP4.06□□□□□ -1.76
USP48-211ENST00000526044 SH3BGRP55822 239 aaPredicted RBP4.06□□□□□ -1.76
USP48-211ENST00000526044 SLC26A5P58743 744 aa4.06□□□□□ -1.76
USP48-211ENST00000526044 SEC61A1P61619 476 aaKnown RBP4.06□□□□□ -1.76
USP48-211ENST00000526044 RPS18P62269 152 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms