RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 DPY19L4Q7Z388 723 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 TMEM156Q8N614 296 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 APOBEC4Q8WW27 367 aaKnown RBP9.32□□□□□ -0.92
MCF2-209ENST00000520602 OR14A2Q96R54 314 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 CTRCQ99895 268 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 TP63Q9H3D4 680 aaPredicted RBP9.32□□□□□ -0.92
MCF2-209ENST00000520602 TAS2R10Q9NYW0 307 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 FLRT3Q9NZU0 649 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 PPP4R1LQ9P1A2 415 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 PPIEQ9UNP9 301 aaKnown RBP9.32□□□□□ -0.92
MCF2-209ENST00000520602 MEIOCA2RUB1 952 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 FOXS1O43638 330 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 SLC16A7O60669 478 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 FOXL2P58012 376 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 ACY1Q03154 408 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 SQSTM1Q13501 440 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 CBLN3Q6UW01 205 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 SLC35D2Q76EJ3 337 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 OMA1Q96E52 524 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 NEURL2Q9BR09 285 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 NUDT22Q9BRQ3 303 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 C11orf54Q9H0W9 315 aaPredicted RBP9.32□□□□□ -0.92
MCF2-209ENST00000520602 TMEM138Q9NPI0 162 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 INPP5EQ9NRR6 644 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 SERINC1Q9NRX5 453 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 QPCTLQ9NXS2 382 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 DNAJB12Q9NXW2 375 aaKnown RBP9.32□□□□□ -0.92
MCF2-209ENST00000520602 KCNE5Q9UJ90 142 aa9.32□□□□□ -0.92
MCF2-209ENST00000520602 LAMTOR5O43504 91 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 ICOSLGO75144 302 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 SCRG1O75711 98 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 PIAS2O75928 621 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 OR7A10O76100 309 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 LALBAP00709 142 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 CD14P08571 375 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 OR2T7P0C7T2 308 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 PPICP45877 212 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 AGAP6Q5VW22 663 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 DPY19L2P2Q6ZN68 376 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 TMPRSS11FQ6ZWK6 438 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 VASH1Q7L8A9 365 aaPredicted RBP9.31□□□□□ -0.92
MCF2-209ENST00000520602 JAGN1Q8N5M9 183 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 OR2T27Q8NH04 317 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 OR5J2Q8NH18 312 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 CCDC74AQ96AQ1 378 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 ORAI1Q96D31 301 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 ZNF578Q96N58 590 aaPredicted RBP9.31□□□□□ -0.92
MCF2-209ENST00000520602 AGAP4Q96P64 663 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 ORAI3Q9BRQ5 295 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 CACNA1EQ15878 2313 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 ANKRD61A6NGH8 418 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 LILRA5A6NI73 299 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 C9J4A7 227 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 H0YIG0 161 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 SMIM10L1P0DMW3 83 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 FOLR1P15328 257 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 TGM1P22735 817 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 SLC6A8P48029 635 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 OR10A3P58181 314 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 ELAVL1Q15717 326 aaKnown RBP9.31□□□□□ -0.92
MCF2-209ENST00000520602 CARD17Q5XLA6 110 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 TMEM225Q6GV28 225 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 TMPRSS9Q7Z410 1059 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 OR5AK2Q8NH90 309 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 PMM1Q92871 262 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 SMIM10Q96HG1 83 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 RNF121Q9H920 327 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 MEPEQ9NQ76 525 aaPredicted RBP9.31□□□□□ -0.92
MCF2-209ENST00000520602 ACOXLQ9NUZ1 547 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 MMACHCQ9Y4U1 282 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 LAMA3Q16787 3333 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 DOCK8Q8NF50 2099 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 A0A1B0GX78 115 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 WNT1P04628 370 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 IL9P15248 144 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 BCKDHBP21953 392 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 RBM34P42696 430 aaKnown RBP9.31□□□□□ -0.92
MCF2-209ENST00000520602 PITPNBP48739 271 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 OR7A5Q15622 319 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 NTRK2Q16620 822 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 BTBD16Q32M84 506 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 CCDC190Q86UF4 302 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 ZNF321PQ8N8H1 164 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 CHST4Q8NCG5 386 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 NXPE2Q96DL1 559 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 S100A16Q96FQ6 103 aaKnown RBP9.31□□□□□ -0.92
MCF2-209ENST00000520602 THAP7Q9BT49 309 aaPredicted RBP9.31□□□□□ -0.92
MCF2-209ENST00000520602 ELL3Q9HB65 397 aaPredicted RBP9.31□□□□□ -0.92
MCF2-209ENST00000520602 ING4Q9UNL4 249 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 SRPK3Q9UPE1 567 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 TMEM14AQ9Y6G1 99 aa9.31□□□□□ -0.92
MCF2-209ENST00000520602 RP1L1Q8IWN7 2480 aaPredicted RBP9.31□□□□□ -0.92
MCF2-209ENST00000520602 TRBV11-1A0A0K0K1C0 115 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 IQCMA0A1B0GVH7 501 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 SSX4O60224 188 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 DRD5P21918 477 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 CFL1P23528 166 aaKnown RBP9.3□□□□□ -0.92
MCF2-209ENST00000520602 SFTPDP35247 375 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 FASLGP48023 281 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 ADAM8P78325 824 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms