RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 ZSCAN1Q8NBB4 408 aa13.58□□□□□ -0.24
NUP54-217ENST00000514987 SLC7A6Q92536 515 aa13.58□□□□□ -0.24
NUP54-217ENST00000514987 ST6GAL2Q96JF0 529 aa13.58□□□□□ -0.24
NUP54-217ENST00000514987 HSPA12BQ96MM6 686 aa13.58□□□□□ -0.24
NUP54-217ENST00000514987 MNTQ99583 582 aa13.58□□□□□ -0.24
NUP54-217ENST00000514987 YIPF2Q9BWQ6 316 aa13.58□□□□□ -0.24
NUP54-217ENST00000514987 HDHD2Q9H0R4 259 aa13.58□□□□□ -0.24
NUP54-217ENST00000514987 B3GAT2Q9NPZ5 323 aa13.58□□□□□ -0.24
NUP54-217ENST00000514987 NANSQ9NR45 359 aa13.58□□□□□ -0.24
NUP54-217ENST00000514987 DDX28Q9NUL7 540 aaKnown RBP13.58□□□□□ -0.24
NUP54-217ENST00000514987 ADAM18Q9Y3Q7 739 aa13.58□□□□□ -0.24
NUP54-217ENST00000514987 A0A0G2JK05 382 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 TRBV2A0A0J9YWF9 115 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 DVL2O14641 736 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 NUDT21O43809 227 aaKnown RBP13.57□□□□□ -0.24
NUP54-217ENST00000514987 SLC43A1O75387 559 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 TXNDC12O95881 172 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 IGKV3-11P04433 115 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 HIST1H2ABP04908 130 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 UCHL1P09936 223 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 ERVK-25P63136 954 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 BCL2A1Q16548 175 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 ZNF57Q68EA5 555 aaPredicted RBP13.57□□□□□ -0.24
NUP54-217ENST00000514987 UNQ9370/PRO34162Q6UXP9 181 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 TTLL10Q6ZVT0 673 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 HIST3H2AQ7L7L0 130 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 SSX6Q7RTT6 188 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 KMT5CQ86Y97 462 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 DEFB119Q8N690 84 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 C10orf53Q8N6V4 93 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 NLGN4YQ8NFZ3 816 aaPredicted RBP13.57□□□□□ -0.24
NUP54-217ENST00000514987 TRMT10AQ8TBZ6 339 aaKnown RBP13.57□□□□□ -0.24
NUP54-217ENST00000514987 DAZLQ92904 295 aaKnown RBP13.57□□□□□ -0.24
NUP54-217ENST00000514987 HIST1H2ACQ93077 130 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 RFT1Q96AA3 541 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 NMNAT3Q96T66 252 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 MARVELD1Q9BSK0 173 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 NXF5Q9H1B4 397 aaKnown RBP13.57□□□□□ -0.24
NUP54-217ENST00000514987 PPIL3Q9H2H8 161 aaKnown RBP13.57□□□□□ -0.24
NUP54-217ENST00000514987 RPRD1BQ9NQG5 326 aaKnown RBP13.57□□□□□ -0.24
NUP54-217ENST00000514987 KLHL1Q9NR64 748 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 GNG8Q9UK08 70 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 CA14Q9ULX7 337 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 N6AMT1Q9Y5N5 214 aa13.57□□□□□ -0.24
NUP54-217ENST00000514987 A0A0G2JMP0 313 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 A0A0X1KG70 313 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 A0A1W2PQD3 144 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 A0A1W2PRG6 482 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 FAM172BPA6NC97 362 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 OR6C68A6NDL8 312 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 OR2W5A6NFC9 320 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 H3BMH7 237 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 PDCD5O14737 125 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 RGS13O14921 159 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 TO15178 435 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 DUX1O43812 170 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 EIF4E2O60573 245 aaKnown RBP13.56□□□□□ -0.24
NUP54-217ENST00000514987 FAM157BP0CG42 384 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 PSKH1P11801 424 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 EDNRAP25101 427 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 SDHAP31040 664 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 NAA10P41227 235 aaPredicted RBP13.56□□□□□ -0.24
NUP54-217ENST00000514987 CLDN20P56880 219 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 RPL6Q02878 288 aaKnown RBP13.56□□□□□ -0.24
NUP54-217ENST00000514987 CD226Q15762 336 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 HLA-DQA1Q5Y7H0 255 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 BICRALQ6AI39 1079 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 GPR139Q6DWJ6 353 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 RPTNQ6XPR3 784 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 SLC16A9Q7RTY1 509 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 SLC35F3Q8IY50 421 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 GPR135Q8IZ08 494 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 OR4M2Q8NGB6 313 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 OR4M1Q8NGD0 313 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 RPS4Y2Q8TD47 263 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 ADIPOR1Q96A54 375 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 CREB3L1Q96BA8 519 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 SHDQ96IW2 340 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 WACQ9BTA9 647 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 OR8D2Q9GZM6 311 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 MMP25Q9NPA2 562 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 RXFP3Q9NSD7 469 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 WDR70Q9NW82 654 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 SEMA5BQ9P283 1151 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 RNF215Q9Y6U7 377 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 MAU2Q9Y6X3 613 aa13.56□□□□□ -0.24
NUP54-217ENST00000514987 OR6C76A6NM76 312 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 FZD7O75084 574 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 PIAS2O75928 621 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 DDAH2O95865 285 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 EIF4EP06730 217 aaKnown RBP13.55□□□□□ -0.24
NUP54-217ENST00000514987 ASAH2BP0C7U1 165 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 FBLP22087 321 aaKnown RBP13.55□□□□□ -0.24
NUP54-217ENST00000514987 ALAS2P22557 587 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 IL12BP29460 328 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 UQCRC1P31930 480 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 CCR4P51679 360 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 RAB25P57735 213 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 BTG1P62324 171 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 GPLD1P80108 840 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms