RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 PPIBP23284 216 aaKnown RBP11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 ACVR1BP36896 505 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 FABP6P51161 128 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 ZNF83P51522 516 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 NUDT6P53370 316 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 CEACAM7Q14002 265 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 COX20Q5RI15 118 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 CLEC2AQ6UVW9 174 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 DNM1P46Q6ZS02 220 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 AAED1Q7RTV5 226 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 OR9K2Q8NGE7 335 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 MGARPQ8TDB4 240 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 SLC38A5Q8WUX1 472 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 NEUROG1Q92886 237 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 EVA1AQ9H8M9 152 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 C12orf10Q9HB07 376 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 BCL2L10Q9HD36 194 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 SLC17A5Q9NRA2 495 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 TMEM45AQ9NWC5 275 aa11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 ZNF443Q9Y2A4 671 aaPredicted RBP11.95□□□□□ -0.5
CCHCR1-227ENST00000508852 CHD3Q12873 2000 aaKnown RBP11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 C5orf58C9J3I9 102 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 H7C417 338 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 M0R1B8 84 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 OR2T1O43869 369 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 ADAM11O75078 769 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 CRLF1O75462 422 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 IGHV4-39P01824 125 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 ETFAP13804 333 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 EDNRAP25101 427 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 GTF2E2P29084 291 aaKnown RBP11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 APOBEC3AP31941 199 aaPredicted RBP11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 ACAA2P42765 397 aaKnown RBP11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 MRPL19P49406 292 aaKnown RBP11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 MAGOHP61326 146 aaKnown RBP11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 PLAURQ03405 335 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 OR7A5Q15622 319 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 C6orf10Q5SRN2 563 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 ZNF836Q6ZNA1 936 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 HMGN2P46Q86SG4 172 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 GPAT4Q86UL3 456 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 CADM2Q8N3J6 435 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 GOLGA6L1Q8N7Z2 621 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 ANKK1Q8NFD2 765 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 BHLHE22Q8NFJ8 381 aaPredicted RBP11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 BBS10Q8TAM1 723 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 KCNS3Q9BQ31 491 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 SPATA5L1Q9BVQ7 753 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 SLC7A10Q9NS82 523 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 RPS6KB2Q9UBS0 482 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 CORO2BQ9UQ03 480 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 B3GALT5Q9Y2C3 310 aa11.94□□□□□ -0.5
CCHCR1-227ENST00000508852 VSTM5A8MXK1 200 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 E7EQL1 145 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 ZNF587BE7ETH6 402 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 POLR3GO15318 223 aaPredicted RBP11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 CD5LO43866 347 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 AHSA1O95433 338 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 IFNA2P01563 188 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 ETS2P15036 469 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 SLC25A16P16260 332 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 MVDP53602 400 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 SH3BGRP55822 239 aaPredicted RBP11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 C3orf36Q3SXR2 165 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 ZNF311Q5JNZ3 666 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 TSPO2Q5TGU0 170 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 C1orf140Q5VVS0 124 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 C11orf71Q6IPW1 123 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 ATG4DQ86TL0 474 aaPredicted RBP11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 VRK2Q86Y07 508 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 KRT73Q86Y46 540 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 TMEM99Q8N816 258 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 OR52E4Q8NGH9 312 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 MFSD8Q8NHS3 518 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 MAGEE2Q8TD90 523 aaPredicted RBP11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 TLCD1Q96CP7 247 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 TMEM19Q96HH6 336 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 CACNG6Q9BXT2 260 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 A4GALTQ9NPC4 353 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 RLIMQ9NVW2 624 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 ATP23Q9Y6H3 246 aa11.93□□□□□ -0.5
CCHCR1-227ENST00000508852 ZC3H12DA2A288 527 aaKnown RBP11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 CLIC1O00299 241 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 AKAP8O43823 692 aaKnown RBP11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 SSX4O60224 188 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 AKR7A3O95154 331 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 GKN3PP0CG01 181 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 PNMTP11086 282 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 BMP2P12643 396 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 PRKAR1BP31321 381 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 NTF4P34130 210 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 UBE2NP61088 152 aaKnown RBP11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 MFSD13AQ14CX5 517 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 RGNQ15493 299 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 MAPK11Q15759 364 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 SLC9B1Q4ZJI4 515 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 EPGNQ6UW88 154 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 NET1Q7Z628 596 aaPredicted RBP11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 FAM169BQ8N8A8 192 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms