RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 TGFBR3Q03167 851 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 BNIP2Q12982 314 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 GSTA3Q16772 222 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 LIN52Q52LA3 116 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 C6orf52Q5T4I8 152 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 KLHL24Q6TFL4 600 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 GPAT4Q86UL3 456 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 ZIC4Q8N9L1 334 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 GLB1L3Q8NCI6 653 aaPredicted RBP10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 REPIN1Q9BWE0 567 aaKnown RBP10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 SF3B5Q9BWJ5 86 aaKnown RBP10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 MANSC1Q9H8J5 431 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 ADPRHL2Q9NX46 363 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 ZNF443Q9Y2A4 671 aaPredicted RBP10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 ELOA3DA6NLF2 546 aaPredicted RBP10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 FRS3O43559 492 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 ANP32DO95626 131 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 WNT11O96014 354 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 IL6P05231 212 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 PRG2P13727 222 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 SLC25A16P16260 332 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 ACAA2P42765 397 aaKnown RBP10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 CRATP43155 626 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 CRISP3P54108 245 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 DSTNP60981 165 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 COPZ1P61923 177 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 CHRNB3Q05901 458 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 LGALS3BPQ08380 585 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 LOXL1Q08397 574 aaPredicted RBP10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 TMEM249Q2WGJ8 235 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 ELOA3BQ3SY89 546 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 CHRFAM7AQ494W8 412 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 GTDC1Q4AE62 458 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 PDCD4Q53EL6 469 aaKnown RBP10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 HIKESHIQ53FT3 197 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 RPS26P11Q5JNZ5 115 aaPredicted RBP10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 NXNQ6DKJ4 435 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 WBP2NLQ6ICG8 309 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 PODNL1Q6PEZ8 512 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 CLIP4Q8N3C7 705 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 POMGNT2Q8NAT1 580 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 ELOA3Q8NG57 546 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 MGARPQ8TDB4 240 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 FAM168AQ92567 244 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 AURKBQ96GD4 344 aaPredicted RBP10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 TNFRSF13CQ96RJ3 184 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 TAPBPLQ9BX59 468 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 THAP1Q9NVV9 213 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 CALML5Q9NZT1 146 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 MOKQ9UQ07 419 aa10.09□□□□□ -0.79
HMGCS1-204ENST00000507293 TMEM120BA0PK00 339 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 RNF212BA8MTL3 300 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 A8MVM7 634 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 KLF11O14901 512 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 SNNO75324 88 aaPredicted RBP10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 SLC22A3O75751 556 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 KRT33AO76009 404 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 LY6HO94772 140 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 IFNA2P01563 188 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 CSF3P09919 207 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 TFPTP0C1Z6 253 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 IDO1P14902 403 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 NCF2P19878 526 aaPredicted RBP10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 APOBEC3AP31941 199 aaPredicted RBP10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 P2RY4P51582 365 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 EFNA4P52798 201 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 LARS2Q15031 903 aaKnown RBP10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 TBRG1Q3YBR2 411 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 SLC9B1Q4ZJI4 515 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 C1QTNF12Q5T7M4 302 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 RNF220Q5VTB9 566 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 C1orf140Q5VVS0 124 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 TMEM225Q6GV28 225 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 ABHD12BQ7Z5M8 362 aaPredicted RBP10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 CROCCP2Q86T23 111 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 SERPINA11Q86U17 422 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 OR1K1Q8NGR3 316 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 C10orf105Q8TEF2 133 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 SLC38A5Q8WUX1 472 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 NANOS1Q8WY41 292 aaKnown RBP10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 TMEM19Q96HH6 336 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 ITCHQ96J02 903 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 MAELQ96JY0 434 aaKnown RBP10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 ALKBH3Q96Q83 286 aaPredicted RBP10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 PIF1Q9H611 641 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 TPT1P8Q9HAU6 139 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 CACYBPQ9HB71 228 aaKnown RBP10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 RAB21Q9UL25 225 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 CHST2Q9Y4C5 530 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 PMF1-BGLAPU3KQ54 211 aa10.08□□□□□ -0.8
HMGCS1-204ENST00000507293 IGHV1-18A0A0C4DH31 117 aa10.07□□□□□ -0.8
HMGCS1-204ENST00000507293 TMEM229AB2RXF0 380 aa10.07□□□□□ -0.8
HMGCS1-204ENST00000507293 ZNF587BE7ETH6 402 aa10.07□□□□□ -0.8
HMGCS1-204ENST00000507293 SLCO1B7G3V0H7 640 aa10.07□□□□□ -0.8
HMGCS1-204ENST00000507293 AHSA1O95433 338 aa10.07□□□□□ -0.8
HMGCS1-204ENST00000507293 LGI1O95970 557 aa10.07□□□□□ -0.8
HMGCS1-204ENST00000507293 ZCCHC18P0CG32 403 aa10.07□□□□□ -0.8
HMGCS1-204ENST00000507293 BMP4P12644 408 aa10.07□□□□□ -0.8
HMGCS1-204ENST00000507293 ZNF16P17020 682 aaPredicted RBP10.07□□□□□ -0.8
HMGCS1-204ENST00000507293 SELENOPP49908 381 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms