RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 AKR7A3O95154 331 aa17.3■□□□□ 0.36
SREBF1-216ENST00000490796 IFNA2P01563 188 aa17.3■□□□□ 0.36
SREBF1-216ENST00000490796 BCHEP06276 602 aa17.3■□□□□ 0.36
SREBF1-216ENST00000490796 ETFAP13804 333 aa17.3■□□□□ 0.36
SREBF1-216ENST00000490796 DSTNP60981 165 aa17.3■□□□□ 0.36
SREBF1-216ENST00000490796 PDCD4Q53EL6 469 aaKnown RBP17.3■□□□□ 0.36
SREBF1-216ENST00000490796 C1QTNF12Q5T7M4 302 aa17.3■□□□□ 0.36
SREBF1-216ENST00000490796 ZNF836Q6ZNA1 936 aa17.3■□□□□ 0.36
SREBF1-216ENST00000490796 DNM1P46Q6ZS02 220 aa17.3■□□□□ 0.36
SREBF1-216ENST00000490796 VRK2Q86Y07 508 aa17.3■□□□□ 0.36
SREBF1-216ENST00000490796 TMEM99Q8N816 258 aa17.3■□□□□ 0.36
SREBF1-216ENST00000490796 OR9K2Q8NGE7 335 aa17.3■□□□□ 0.36
SREBF1-216ENST00000490796 TMEM45BQ96B21 275 aa17.3■□□□□ 0.36
SREBF1-216ENST00000490796 ITCHQ96J02 903 aa17.3■□□□□ 0.36
SREBF1-216ENST00000490796 ADPRHL2Q9NX46 363 aa17.3■□□□□ 0.36
SREBF1-216ENST00000490796 THUMPD1Q9NXG2 353 aaKnown RBP17.3■□□□□ 0.36
SREBF1-216ENST00000490796 PMF1-BGLAPU3KQ54 211 aa17.3■□□□□ 0.36
SREBF1-216ENST00000490796 CDHR4A6H8M9 788 aa17.29■□□□□ 0.36
SREBF1-216ENST00000490796 LIPT2A6NK58 231 aa17.29■□□□□ 0.36
SREBF1-216ENST00000490796 A8MVM7 634 aa17.29■□□□□ 0.36
SREBF1-216ENST00000490796 PDLIM1O00151 329 aa17.29■□□□□ 0.36
SREBF1-216ENST00000490796 C6orf10Q5SRN2 563 aa17.29■□□□□ 0.36
SREBF1-216ENST00000490796 C11orf71Q6IPW1 123 aa17.29■□□□□ 0.36
SREBF1-216ENST00000490796 WDR31Q8NA23 367 aa17.29■□□□□ 0.36
SREBF1-216ENST00000490796 KCNS3Q9BQ31 491 aa17.29■□□□□ 0.36
SREBF1-216ENST00000490796 AMBRA1Q9C0C7 1298 aa17.29■□□□□ 0.36
SREBF1-216ENST00000490796 TPT1P8Q9HAU6 139 aa17.29■□□□□ 0.36
SREBF1-216ENST00000490796 RAB21Q9UL25 225 aa17.29■□□□□ 0.36
SREBF1-216ENST00000490796 ZNF443Q9Y2A4 671 aaPredicted RBP17.29■□□□□ 0.36
SREBF1-216ENST00000490796 IGHV4-30-2A0A087WSY4 118 aa17.28■□□□□ 0.36
SREBF1-216ENST00000490796 AQP7P3A6NL99 342 aa17.28■□□□□ 0.36
SREBF1-216ENST00000490796 A8MV72 311 aaPredicted RBP17.28■□□□□ 0.36
SREBF1-216ENST00000490796 VAMP5O95183 116 aa17.28■□□□□ 0.36
SREBF1-216ENST00000490796 WDR4P57081 412 aaKnown RBP17.28■□□□□ 0.36
SREBF1-216ENST00000490796 BNIP2Q12982 314 aa17.28■□□□□ 0.36
SREBF1-216ENST00000490796 HMBOX1Q6NT76 420 aa17.28■□□□□ 0.36
SREBF1-216ENST00000490796 B3GLCTQ6Y288 498 aa17.28■□□□□ 0.36
SREBF1-216ENST00000490796 CXXC5Q7LFL8 322 aaKnown RBP17.28■□□□□ 0.36
SREBF1-216ENST00000490796 HTRA1Q92743 480 aa17.28■□□□□ 0.36
SREBF1-216ENST00000490796 AURKBQ96GD4 344 aaPredicted RBP17.28■□□□□ 0.36
SREBF1-216ENST00000490796 ZNF385AQ96PM9 386 aaKnown RBP17.28■□□□□ 0.36
SREBF1-216ENST00000490796 PIF1Q9H611 641 aa17.28■□□□□ 0.36
SREBF1-216ENST00000490796 MANSC1Q9H8J5 431 aa17.28■□□□□ 0.36
SREBF1-216ENST00000490796 TMEM45AQ9NWC5 275 aa17.28■□□□□ 0.36
SREBF1-216ENST00000490796 ZIM2Q9NZV7 527 aa17.28■□□□□ 0.36
SREBF1-216ENST00000490796 IFT52Q9Y366 437 aa17.28■□□□□ 0.36
SREBF1-216ENST00000490796 CR1P17927 2039 aa17.28■□□□□ 0.36
SREBF1-216ENST00000490796 A0A096LPI6 279 aa17.27■□□□□ 0.36
SREBF1-216ENST00000490796 A0A0G2JPF8 293 aa17.27■□□□□ 0.36
SREBF1-216ENST00000490796 HNRNPCL2B2RXH8 293 aa17.27■□□□□ 0.36
SREBF1-216ENST00000490796 HNRNPCL3B7ZW38 293 aa17.27■□□□□ 0.36
SREBF1-216ENST00000490796 ZNF587BE7ETH6 402 aa17.27■□□□□ 0.36
SREBF1-216ENST00000490796 UBDO15205 165 aa17.27■□□□□ 0.36
SREBF1-216ENST00000490796 HNRNPCL1O60812 293 aaKnown RBP17.27■□□□□ 0.36
SREBF1-216ENST00000490796 SNNO75324 88 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-216ENST00000490796 ZCCHC18P0CG32 403 aa17.27■□□□□ 0.36
SREBF1-216ENST00000490796 HNRNPCL4P0DMR1 293 aa17.27■□□□□ 0.36
SREBF1-216ENST00000490796 SLC25A16P16260 332 aa17.27■□□□□ 0.36
SREBF1-216ENST00000490796 GTF2E2P29084 291 aaKnown RBP17.27■□□□□ 0.36
SREBF1-216ENST00000490796 APOBEC3AP31941 199 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-216ENST00000490796 UBE2NP61088 152 aaKnown RBP17.27■□□□□ 0.36
SREBF1-216ENST00000490796 RNF220Q5VTB9 566 aa17.27■□□□□ 0.36
SREBF1-216ENST00000490796 C1orf140Q5VVS0 124 aa17.27■□□□□ 0.36
SREBF1-216ENST00000490796 PRAMEF8Q5VWM4 474 aa17.27■□□□□ 0.36
SREBF1-216ENST00000490796 PRAMEF7Q5VXH5 474 aa17.27■□□□□ 0.36
SREBF1-216ENST00000490796 PODNL1Q6PEZ8 512 aa17.27■□□□□ 0.36
SREBF1-216ENST00000490796 MSANTD1Q6ZTZ1 278 aa17.27■□□□□ 0.36
SREBF1-216ENST00000490796 SLC38A5Q8WUX1 472 aa17.27■□□□□ 0.36
SREBF1-216ENST00000490796 FAM168AQ92567 244 aa17.27■□□□□ 0.36
SREBF1-216ENST00000490796 TMEM19Q96HH6 336 aa17.27■□□□□ 0.36
SREBF1-216ENST00000490796 SLC6A13Q9NSD5 602 aa17.27■□□□□ 0.36
SREBF1-216ENST00000490796 OR6C65A6NJZ3 312 aa17.26■□□□□ 0.35
SREBF1-216ENST00000490796 H7C417 338 aa17.26■□□□□ 0.35
SREBF1-216ENST00000490796 KLF11O14901 512 aa17.26■□□□□ 0.35
SREBF1-216ENST00000490796 AHSA1O95433 338 aa17.26■□□□□ 0.35
SREBF1-216ENST00000490796 TFPTP0C1Z6 253 aa17.26■□□□□ 0.35
SREBF1-216ENST00000490796 ACAA2P42765 397 aaKnown RBP17.26■□□□□ 0.35
SREBF1-216ENST00000490796 POLR2JP52435 117 aaKnown RBP17.26■□□□□ 0.35
SREBF1-216ENST00000490796 CHRFAM7AQ494W8 412 aa17.26■□□□□ 0.35
SREBF1-216ENST00000490796 SLC9B1Q4ZJI4 515 aa17.26■□□□□ 0.35
SREBF1-216ENST00000490796 HIKESHIQ53FT3 197 aa17.26■□□□□ 0.35
SREBF1-216ENST00000490796 ZNF311Q5JNZ3 666 aa17.26■□□□□ 0.35
SREBF1-216ENST00000490796 RPS26P11Q5JNZ5 115 aaPredicted RBP17.26■□□□□ 0.35
SREBF1-216ENST00000490796 LSRQ86X29 649 aaPredicted RBP17.26■□□□□ 0.35
SREBF1-216ENST00000490796 HIPK1Q86Z02 1210 aa17.26■□□□□ 0.35
SREBF1-216ENST00000490796 MIER2Q8N344 545 aa17.26■□□□□ 0.35
SREBF1-216ENST00000490796 ZNF525Q8N782 197 aa17.26■□□□□ 0.35
SREBF1-216ENST00000490796 OR10H5Q8NGA6 315 aa17.26■□□□□ 0.35
SREBF1-216ENST00000490796 SPATA9Q9BWV2 254 aa17.26■□□□□ 0.35
SREBF1-216ENST00000490796 RAD21L1Q9H4I0 556 aa17.26■□□□□ 0.35
SREBF1-216ENST00000490796 OBP2BQ9NPH6 170 aa17.26■□□□□ 0.35
SREBF1-216ENST00000490796 RPS6KB2Q9UBS0 482 aa17.26■□□□□ 0.35
SREBF1-216ENST00000490796 RASD1Q9Y272 281 aa17.26■□□□□ 0.35
SREBF1-216ENST00000490796 ANK3Q12955 4377 aaKnown RBP17.26■□□□□ 0.35
SREBF1-216ENST00000490796 DSPPQ9NZW4 1301 aa17.25■□□□□ 0.35
SREBF1-216ENST00000490796 C5orf58C9J3I9 102 aa17.25■□□□□ 0.35
SREBF1-216ENST00000490796 ATP6V1G2-DDX39BF2Z307 99 aa17.25■□□□□ 0.35
SREBF1-216ENST00000490796 GPRIN2O60269 458 aa17.25■□□□□ 0.35
SREBF1-216ENST00000490796 CSF3P09919 207 aa17.25■□□□□ 0.35
SREBF1-216ENST00000490796 MVDP53602 400 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms