RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 PRORSD1PA6NEY8 169 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 AQP12BA6NM10 295 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 C9JVG2 144 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 NME4O00746 187 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 GSTA4O15217 222 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 SEC14L5O43304 696 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 PGM3O95394 542 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 ETHE1O95571 254 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 IGKV3-11P04433 115 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 GPIP06744 558 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 CCDC159P0C7I6 412 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 ZNF888P0CJ79 500 aaPredicted RBP6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 UMPSP11172 480 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 FCGR1AP12314 374 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 HOXB6P17509 224 aaKnown RBP6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 PRPH2P23942 346 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 SLC6A2P23975 617 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 SLC7A1P30825 629 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 S100A3P33764 101 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 HSD17B2P37059 387 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 MS4A2Q01362 244 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 HMGCS1Q01581 520 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 EGR3Q06889 387 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 ACSM2AQ08AH3 577 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 LAPTM5Q13571 262 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 PWP1Q13610 501 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 TSTA3Q13630 321 aaPredicted RBP6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 EFNB3Q15768 340 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 LRRC36Q1X8D7 754 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 RFTN2Q52LD8 501 aaPredicted RBP6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 MTX3Q5HYI7 312 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 ZNF311Q5JNZ3 666 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 PAGE2BQ5JRK9 111 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 C6orf10Q5SRN2 563 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 THEMIS2Q5TEJ8 643 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 ACSM2BQ68CK6 577 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 GRHL2Q6ISB3 625 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 MFSD12Q6NUT3 480 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 RNF111Q6ZNA4 994 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 Q6ZSV7 163 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 MSANTD1Q6ZTZ1 278 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 P2RY8Q86VZ1 359 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 AQP12AQ8IXF9 295 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 SLC15A3Q8IY34 581 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 KLHDC8AQ8IYD2 350 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 ZCCHC24Q8N2G6 241 aaKnown RBP6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 TMEM86BQ8N661 226 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 ZSCAN4Q8NAM6 433 aaPredicted RBP6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 FAM156AQ8NDB6 213 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 DYRK2Q92630 601 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 GFM2Q969S9 779 aaKnown RBP6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 UBE2E3Q969T4 207 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 EME1Q96AY2 570 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 YY1AP1Q9H869 796 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 COPS7BQ9H9Q2 264 aaPredicted RBP6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 BRF2Q9HAW0 419 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 GLRX2Q9NS18 164 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 VPS29Q9UBQ0 182 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 SCOCQ9UIL1 159 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 MAGEL2Q9UJ55 1249 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 MRPS18CQ9Y3D5 142 aaKnown RBP6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 PCDHA9Q9Y5H5 950 aa6.39□□□□□ -1.39
EXOSC3-206ENST00000489414 SRRM2Q9UQ35 2752 aaKnown RBP6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 PRSS51A0A1B0GVH4 220 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 TCRBV3S1A0A5B6 114 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 DHRS12A0PJE2 317 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 MAGEA13PA6NCF6 341 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 NPIPB8E9PQR5 432 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 H3BNX3 289 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 FXYD1O00168 92 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 AKAP10O43572 662 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 LCMT2O60294 686 aaKnown RBP6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 ZIC3O60481 467 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 LYZL6O75951 148 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 SLC16A8O95907 504 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 LHBP01229 141 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 PCNAP12004 261 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 BCKDHAP12694 445 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 CD33P20138 364 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 PRPS1L1P21108 318 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 PEX2P28328 305 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 PTGDSP41222 190 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 ASMTP46597 345 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 TMED10P49755 219 aaKnown RBP6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 CLDN8P56748 225 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 LIPEQ05469 1076 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 MED21Q13503 144 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 SPIN4Q56A73 249 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 OGFRL1Q5TC84 451 aaPredicted RBP6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 LPCAT4Q643R3 524 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 LCN8Q6JVE9 175 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 MED27Q6P2C8 311 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 TMEM81Q6P7N7 255 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 SLC2A7Q6PXP3 512 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 CYP2R1Q6VVX0 501 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 TMEM64Q6YI46 380 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 SDR9C7Q8NEX9 313 aa6.38□□□□□ -1.39
EXOSC3-206ENST00000489414 OR8J3Q8NGG0 315 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms