RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-215	ENST00000482714	ZNF74	Q16587	644 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	ACSF3	Q4G176	576 aa	Predicted RBP	13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	FGD3	Q5JSP0	725 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	C1orf185	Q5T7R7	199 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	C1QL3	Q5VWW1	255 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	B3GNT6	Q6ZMB0	384 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	MAMDC2	Q7Z304	686 aa	Predicted RBP	13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	ADPRHL1	Q8NDY3	354 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	OR52J3	Q8NH60	311 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	STMN2	Q93045	179 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	PRRG4	Q9BZD6	226 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	S100A14	Q9HCY8	104 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	ZNF229	Q9UJW7	825 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	SAMHD1	Q9Y3Z3	626 aa	Known RBP	13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	MBD3L4	A6NDZ8	208 aa	Predicted RBP	13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	MBD3L3	A6NE82	208 aa	Predicted RBP	13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	ARRDC5	A6NEK1	342 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	MBD3L5	A6NJ08	208 aa	Predicted RBP	13.74	□□□□□ -0.21
CCM2-215	ENST00000482714		H0YC42	278 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	BGLAP	P02818	100 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	HIST1H2AB	P04908	130 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	CRH	P06850	196 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	FUT1	P19526	365 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	GTF2E2	P29084	291 aa	Known RBP	13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	SLC9A3	P48764	834 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	UGT2B15	P54855	530 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	TPD52	P55327	224 aa	Predicted RBP	13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	RNPS1	Q15287	305 aa	Known RBP	13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	IGFBP7	Q16270	282 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	C3AR1	Q16581	482 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	MICA	Q29983	383 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	C1orf94	Q6P1W5	598 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	HIST3H2A	Q7L7L0	130 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	OR4K5	Q8NGD3	323 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	OR4C15	Q8NGM1	316 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	PIGX	Q8TBF5	258 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	PYDC1	Q8WXC3	89 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	HIST1H2AC	Q93077	130 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	BPIFA2	Q96DR5	249 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	SGTB	Q96EQ0	304 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	CENPN	Q96H22	339 aa	Predicted RBP	13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	TACO1	Q9BSH4	297 aa	Known RBP	13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	SF3B5	Q9BWJ5	86 aa	Known RBP	13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	OSBPL10	Q9BXB5	764 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	ASPN	Q9BXN1	380 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	RNF122	Q9H9V4	155 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	NANS	Q9NR45	359 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	MRPL39	Q9NYK5	338 aa	Known RBP	13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	OSGIN2	Q9Y236	505 aa		13.74	□□□□□ -0.21
CCM2-215	ENST00000482714	SPEN	Q96T58	3664 aa	Known RBP	13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	TRGV8	A0A0C4DH27	118 aa		13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	TRBV4-1	A0A0J9YWV2	114 aa		13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	SLC22A20	A6NK97	555 aa		13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	ANKRD65	E5RJM6	399 aa		13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	TIPRL	O75663	272 aa		13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	RCBTB2	O95199	551 aa		13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	IFI30	P13284	250 aa		13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	ERF	P50548	548 aa		13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	LTB	Q06643	244 aa		13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	ZP4	Q12836	540 aa		13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	PON3	Q15166	354 aa		13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	OR7A5	Q15622	319 aa		13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	RTL6	Q6ICC9	239 aa		13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	H1FNT	Q75WM6	255 aa	Predicted RBP	13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	NRM	Q8IXM6	262 aa		13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	ZNF845	Q96IR2	970 aa	Predicted RBP	13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	TRIB1	Q96RU8	372 aa		13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	PSD2	Q9BQI7	771 aa		13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	TTYH2	Q9BSA4	534 aa		13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	FANCF	Q9NPI8	374 aa		13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	CLCF1	Q9UBD9	225 aa		13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	RASD1	Q9Y272	281 aa		13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	MEMO1	Q9Y316	297 aa		13.73	□□□□□ -0.21
CCM2-215	ENST00000482714	AQP7P3	A6NL99	342 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	OR10H3	O60404	316 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	CYTIP	O60759	359 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	E2F6	O75461	281 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	OR7A10	O76100	309 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	CCNB2	O95067	398 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	CH25H	O95992	272 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	IL2RA	P01589	272 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	ASAH2B	P0C7U1	165 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	OMP	P47874	163 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	COX10	Q12887	443 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	MRPL49	Q13405	166 aa	Known RBP	13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	TAF11	Q15544	211 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	EXOC3L2	Q2M3D2	409 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	TMEM225	Q6GV28	225 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	TBPL2	Q6SJ96	375 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	FCRLA	Q7L513	359 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	P4HA3	Q7Z4N8	544 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	HIPK1	Q86Z02	1210 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	C10orf53	Q8N6V4	93 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	OR5J2	Q8NH18	312 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	SLC25A36	Q96CQ1	311 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	SRXN1	Q9BYN0	137 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	NTN4	Q9HB63	628 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	KLHL9	Q9P2J3	617 aa		13.72	□□□□□ -0.21

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