RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 C9orf16Q9BUW7 83 aa17.88■□□□□ 0.45
TRAPPC12-220ENST00000482645 COQ10BQ9H8M1 238 aa17.88■□□□□ 0.45
TRAPPC12-220ENST00000482645 IGKV1D-42A0A075B6H8 117 aa17.87■□□□□ 0.45
TRAPPC12-220ENST00000482645 SOCS2O14508 198 aa17.87■□□□□ 0.45
TRAPPC12-220ENST00000482645 OR10H3O60404 316 aa17.87■□□□□ 0.45
TRAPPC12-220ENST00000482645 PRKACGP22612 351 aa17.87■□□□□ 0.45
TRAPPC12-220ENST00000482645 FKBP2P26885 142 aaKnown RBP17.87■□□□□ 0.45
TRAPPC12-220ENST00000482645 CA7P43166 264 aa17.87■□□□□ 0.45
TRAPPC12-220ENST00000482645 RPS5P46782 204 aaKnown RBP17.87■□□□□ 0.45
TRAPPC12-220ENST00000482645 DIO1P49895 249 aa17.87■□□□□ 0.45
TRAPPC12-220ENST00000482645 MAP2K6P52564 334 aa17.87■□□□□ 0.45
TRAPPC12-220ENST00000482645 HMGA2P52926 109 aa17.87■□□□□ 0.45
TRAPPC12-220ENST00000482645 LSM11P83369 360 aaKnown RBP eCLIP17.87■□□□□ 0.45
TRAPPC12-220ENST00000482645 EGR4Q05215 589 aa17.87■□□□□ 0.45
TRAPPC12-220ENST00000482645 C1orf140Q5VVS0 124 aa17.87■□□□□ 0.45
TRAPPC12-220ENST00000482645 TTC33Q6PID6 262 aaPredicted RBP17.87■□□□□ 0.45
TRAPPC12-220ENST00000482645 PFN4Q8NHR9 129 aa17.87■□□□□ 0.45
TRAPPC12-220ENST00000482645 KTI12Q96EK9 354 aaPredicted RBP17.87■□□□□ 0.45
TRAPPC12-220ENST00000482645 SRXN1Q9BYN0 137 aa17.87■□□□□ 0.45
TRAPPC12-220ENST00000482645 HDGFL3Q9Y3E1 203 aa17.87■□□□□ 0.45
TRAPPC12-220ENST00000482645 A0A087WUU8 490 aa17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 EI24O14681 340 aa17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 AHSA1O95433 338 aa17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 STSP08842 583 aa17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 PLA2G2AP14555 144 aa17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 IDUAP35475 653 aa17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 RBM34P42696 430 aaKnown RBP17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 OR2B6P58173 313 aa17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 PON3Q15166 354 aa17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 B3GNT6Q6ZMB0 384 aa17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 TMPPEQ6ZT21 453 aa17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 RRM2BQ7LG56 351 aa17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 FJX1Q86VR8 437 aa17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 NRMQ8IXM6 262 aa17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 ZPLD1Q8TCW7 415 aa17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 STK35Q8TDR2 534 aa17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 SLC25A36Q96CQ1 311 aa17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 NRBF2Q96F24 287 aa17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 PRRG4Q9BZD6 226 aa17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 GABARAPL1Q9H0R8 117 aa17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 TIGARQ9NQ88 270 aa17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 FAM215AQ9Y5M1 114 aa17.86■□□□□ 0.45
TRAPPC12-220ENST00000482645 KIAA1549Q9HCM3 1950 aa17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 IGHV3-15A0A0B4J1V0 119 aa17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 CCL21O00585 134 aa17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 SYNGR4O95473 234 aa17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 CBLP22681 906 aa17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 CLK1P49759 484 aaKnown RBP17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 CSNK2A1P68400 391 aaPredicted RBP17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 SF3B4Q15427 424 aaKnown RBP eCLIP17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 OR7A5Q15622 319 aa17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 ANKRD34AQ69YU3 496 aa17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 RTL6Q6ICC9 239 aa17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 ZBTB49Q6ZSB9 765 aa17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 NCCRP1Q6ZVX7 275 aaPredicted RBP17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 MBOAT2Q6ZWT7 520 aa17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 P4HA3Q7Z4N8 544 aa17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 MEX3DQ86XN8 651 aaKnown RBP17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 C10orf53Q8N6V4 93 aa17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 ATG16L2Q8NAA4 619 aa17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 AQP11Q8NBQ7 271 aa17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 FNDC9Q8TBE3 224 aa17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 ZNF426Q9BUY5 554 aa17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 RASSF4Q9H2L5 321 aa17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 MED31Q9Y3C7 131 aa17.85■□□□□ 0.45
TRAPPC12-220ENST00000482645 SLC22A20A6NK97 555 aa17.84■□□□□ 0.45
TRAPPC12-220ENST00000482645 LRRTM2O43300 516 aa17.84■□□□□ 0.45
TRAPPC12-220ENST00000482645 IMPDH2P12268 514 aa17.84■□□□□ 0.45
TRAPPC12-220ENST00000482645 PTGER4P35408 488 aa17.84■□□□□ 0.45
TRAPPC12-220ENST00000482645 LINC00114Q6XXX2 140 aa17.84■□□□□ 0.45
TRAPPC12-220ENST00000482645 GALNT4Q8N4A0 578 aa17.84■□□□□ 0.45
TRAPPC12-220ENST00000482645 PIGXQ8TBF5 258 aa17.84■□□□□ 0.45
TRAPPC12-220ENST00000482645 ROBO4Q8WZ75 1007 aa17.84■□□□□ 0.45
TRAPPC12-220ENST00000482645 CPNE4Q96A23 557 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC12-220ENST00000482645 FAM46AQ96IP4 442 aaKnown RBP17.84■□□□□ 0.45
TRAPPC12-220ENST00000482645 HS6ST2Q96MM7 605 aa17.84■□□□□ 0.45
TRAPPC12-220ENST00000482645 SLC29A1Q99808 456 aa17.84■□□□□ 0.45
TRAPPC12-220ENST00000482645 TMEM43Q9BTV4 400 aa17.84■□□□□ 0.45
TRAPPC12-220ENST00000482645 TAPBPLQ9BX59 468 aa17.84■□□□□ 0.45
TRAPPC12-220ENST00000482645 POTEKPQ9BYX7 375 aa17.84■□□□□ 0.45
TRAPPC12-220ENST00000482645 VCX3BQ9H321 246 aa17.84■□□□□ 0.45
TRAPPC12-220ENST00000482645 SMURF2Q9HAU4 748 aa17.84■□□□□ 0.45
TRAPPC12-220ENST00000482645 KRCC1Q9NPI7 259 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC12-220ENST00000482645 PAQR5Q9NXK6 330 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC12-220ENST00000482645 MCTS1Q9ULC4 181 aaKnown RBP17.84■□□□□ 0.45
TRAPPC12-220ENST00000482645 TRAV36DV7A0A075B6V5 113 aa17.83■□□□□ 0.45
TRAPPC12-220ENST00000482645 ARRDC5A6NEK1 342 aa17.83■□□□□ 0.45
TRAPPC12-220ENST00000482645 NPIPB7O75200 414 aa17.83■□□□□ 0.45
TRAPPC12-220ENST00000482645 PMS2P2O95744 297 aa17.83■□□□□ 0.45
TRAPPC12-220ENST00000482645 IFI30P13284 250 aa17.83■□□□□ 0.45
TRAPPC12-220ENST00000482645 POU2F1P14859 743 aa17.83■□□□□ 0.45
TRAPPC12-220ENST00000482645 GTF2E2P29084 291 aaKnown RBP17.83■□□□□ 0.45
TRAPPC12-220ENST00000482645 GPR4P46093 362 aa17.83■□□□□ 0.45
TRAPPC12-220ENST00000482645 DAG1Q14118 895 aa17.83■□□□□ 0.45
TRAPPC12-220ENST00000482645 ZNF239Q16600 458 aaKnown RBP17.83■□□□□ 0.45
TRAPPC12-220ENST00000482645 ZNF770Q6IQ21 691 aaPredicted RBP17.83■□□□□ 0.45
TRAPPC12-220ENST00000482645 PGBD2Q6P3X8 592 aa17.83■□□□□ 0.45
TRAPPC12-220ENST00000482645 MAGEE2Q8TD90 523 aaPredicted RBP17.83■□□□□ 0.45
TRAPPC12-220ENST00000482645 TAAR8Q969N4 342 aa17.83■□□□□ 0.45
TRAPPC12-220ENST00000482645 GTPBP3Q969Y2 492 aaKnown RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms