RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 ZCCHC12Q6PEW1 402 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 LINC00114Q6XXX2 140 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 PXKQ7Z7A4 578 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 PRR22Q8IZ63 422 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 ZNF511Q8NB15 262 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 OR11H4Q8NGC9 324 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 MMABQ96EY8 250 aaPredicted RBP9.9□□□□□ -0.82
VPS52-217ENST00000478934 LMF2Q9BU23 707 aaKnown RBP9.9□□□□□ -0.82
VPS52-217ENST00000478934 LRRC61Q9BV99 259 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 MED28Q9H204 178 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 FBRSQ9HAH7 460 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 A0A1B0GTH9 108 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 ACOD1A6NK06 481 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 PRAMEF26H0Y7S4 382 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 ARHGEF9O43307 516 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 GPANK1O95872 356 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 RABIFP47224 123 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 GDI2P50395 445 aaKnown RBP9.89□□□□□ -0.83
VPS52-217ENST00000478934 ZNHIT3Q15649 155 aaPredicted RBP9.89□□□□□ -0.83
VPS52-217ENST00000478934 HES5Q5TA89 166 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 FAAP20Q6NZ36 180 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 APOOLQ6UXV4 268 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 ZNF687Q8N1G0 1237 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.89□□□□□ -0.83
VPS52-217ENST00000478934 TRIM2Q9C040 744 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 SPRTNQ9H040 489 aaPredicted RBP9.89□□□□□ -0.83
VPS52-217ENST00000478934 PRTFDC1Q9NRG1 225 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 RPS6KB2Q9UBS0 482 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 MSRAQ9UJ68 235 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 FLVCR2Q9UPI3 526 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 PCDH15Q96QU1 1955 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 ASXL3Q9C0F0 2248 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 CDC14CA4D256 554 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 C2CD4DB7Z1M9 353 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 NPIPB9F8W1W9 429 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 FCER2P06734 321 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 GAAP10253 952 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 NPR2P20594 1047 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 UQCRC1P31930 480 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 AQP2P41181 271 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 GPR3P46089 330 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 NRG3P56975 720 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 GNG2P59768 71 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 MRPS21P82921 87 aaKnown RBP9.89□□□□□ -0.83
VPS52-217ENST00000478934 TNK1Q13470 666 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 RIN1Q13671 783 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 FGFBP1Q14512 234 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 ZSWIM7Q19AV6 140 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 SFRP4Q6FHJ7 346 aaPredicted RBP9.89□□□□□ -0.83
VPS52-217ENST00000478934 ULK3Q6PHR2 472 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 POMZP3Q6PJE2 187 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 SLC35F2Q8IXU6 374 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 TOMM5Q8N4H5 51 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 ZNF433Q8N7K0 673 aaPredicted RBP9.89□□□□□ -0.83
VPS52-217ENST00000478934 LSMEM1Q8N8F7 131 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 NPEPL1Q8NDH3 523 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 OR7G1Q8NGA0 311 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 OR8H1Q8NGG4 311 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 SNX33Q8WV41 574 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 HOXB13Q92826 284 aaPredicted RBP9.89□□□□□ -0.83
VPS52-217ENST00000478934 CREB3L1Q96BA8 519 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 SGTBQ96EQ0 304 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 Q96M85 177 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 MOGAT1Q96PD6 335 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 RTN4RQ9BZR6 473 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 NRSN2Q9GZP1 204 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 OR10A5Q9H207 317 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 SLCO1C1Q9NYB5 712 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 MGAT4AQ9UM21 535 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 HS3ST3A1Q9Y663 406 aa9.89□□□□□ -0.83
VPS52-217ENST00000478934 IGKV1D-42A0A075B6H8 117 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 KIR2DS5A0A0G2JLQ3 304 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 A0A0G2JNG1 304 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 TRBV2A0A0J9YWF9 115 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 TEX13CA0A0J9YWL9 993 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 KIR2DS3K7RE56 304 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 DCTN6O00399 190 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 RPP14O95059 124 aaKnown RBP9.88□□□□□ -0.83
VPS52-217ENST00000478934 NDUFB2O95178 105 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 AK1P00568 194 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 WNT1P04628 370 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 F13BP05160 661 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 CDKN2AP42771 156 aaKnown RBP9.88□□□□□ -0.83
VPS52-217ENST00000478934 NANOS3P60323 173 aaKnown RBP9.88□□□□□ -0.83
VPS52-217ENST00000478934 CCINQ13939 588 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 KIR2DS5Q14953 304 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 ODF4Q2M2E3 257 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 PRTGQ2VWP7 1150 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 TMEM255AQ5JRV8 349 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 RPL13AP3Q6NVV1 102 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 TMEM151BQ8IW70 566 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 C9orf62Q8N4C0 152 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 C10orf53Q8N6V4 93 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 ZSCAN1Q8NBB4 408 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 ACOT12Q8WYK0 555 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 YIPF5Q969M3 257 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 C3orf49Q96BT1 292 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 HSPA12BQ96MM6 686 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 DGAT2Q96PD7 388 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 ELF4Q99607 663 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms