RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 APOLD1Q96LR9 279 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 FER1L6-AS2Q96M78 137 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 OR2A7Q96R45 310 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 CITED2Q99967 270 aaPredicted RBP3.83□□□□□ -1.8
CD55-208ENST00000476590 KLHDC3Q9BQ90 382 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 REEP2Q9BRK0 252 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 MXRA8Q9BRK3 442 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 FAAP24Q9BTP7 215 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 WRAP53Q9BUR4 548 aaKnown RBP3.83□□□□□ -1.8
CD55-208ENST00000476590 C1QTNF2Q9BXJ5 285 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 CDCA4Q9BXL8 241 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 CHIAQ9BZP6 476 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 WWTR1Q9GZV5 400 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 SIK2Q9H0K1 926 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 WDCPQ9H6R7 721 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 RIOX1Q9H6W3 641 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 IPPKQ9H8X2 491 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 SEC61A2Q9H9S3 476 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 ACKR4Q9NPB9 350 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 PIPOXQ9P0Z9 390 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 USP36Q9P275 1121 aaKnown RBP3.83□□□□□ -1.8
CD55-208ENST00000476590 MGAT4CQ9UBM8 478 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 RPS6KB2Q9UBS0 482 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 SMPXQ9UHP9 88 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 ZNF346Q9UL40 294 aaKnown RBP3.83□□□□□ -1.8
CD55-208ENST00000476590 PADI1Q9ULC6 663 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 A4GNTQ9UNA3 340 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 PRG3Q9Y2Y8 225 aaPredicted RBP3.83□□□□□ -1.8
CD55-208ENST00000476590 TMED3Q9Y3Q3 217 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 POMT1Q9Y6A1 747 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 COLEC10Q9Y6Z7 277 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 SPACA6W5XKT8 324 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 MAST2Q6P0Q8 1798 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 ANKRD31Q8N7Z5 1873 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 C2orf78A6NCI8 922 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 NEURL1BA8MQ27 555 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 ZNF724A8MTY0 619 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 M0R296 226 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 SULT2B1O00204 365 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 BHLHE40O14503 412 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 MEIS2O14770 477 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 EIF4E2O60573 245 aaKnown RBP3.83□□□□□ -1.8
CD55-208ENST00000476590 LILRA1O75019 489 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 MATN4O95460 622 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 TRBC1P01850 177 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 FGBP02675 491 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 ANXA1P04083 346 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 NR2F6P10588 404 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 EPXP11678 715 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 CD19P15391 556 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 GGT1P19440 569 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 GZMHP20718 246 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 GKP32189 559 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 VIPR1P32241 457 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 BRS3P32247 399 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 GRK4P32298 578 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 CRYBB2P43320 205 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 BDKRB1P46663 353 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 MTNR1BP49286 362 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 ZNF140P52738 457 aaPredicted RBP3.83□□□□□ -1.8
CD55-208ENST00000476590 AKR1C2P52895 323 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 EMP2P54851 167 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 DLX5P56178 289 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 DLK1P80370 383 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 HSF1Q00613 529 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 HGFACQ04756 655 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 AKR1C1Q04828 323 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 ZNF235Q14590 738 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 GRM4Q14833 912 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 HERPUD1Q15011 391 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 HMGN3Q15651 99 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 HNRNPA1L2Q32P51 320 aaKnown RBP3.83□□□□□ -1.8
CD55-208ENST00000476590 SIRPB2Q5JXA9 342 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 ATXN7L2Q5T6C5 722 aaPredicted RBP3.83□□□□□ -1.8
CD55-208ENST00000476590 KHDRBS2Q5VWX1 349 aaKnown RBP3.83□□□□□ -1.8
CD55-208ENST00000476590 STEAP4Q687X5 459 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 OR10K2Q6IF99 312 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 FSTL4Q6MZW2 842 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 KIRREL2Q6UWL6 708 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 ADAMTSL4Q6UY14 1074 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 IL34Q6ZMJ4 242 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 ZNF730Q6ZMV8 503 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 TMEM91Q6ZNR0 172 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 OR2W3Q7Z3T1 314 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 GOLGA7Q7Z5G4 137 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 TMEM179BQ7Z7N9 219 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 TRAPPC5Q8IUR0 188 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 PHACTR4Q8IZ21 702 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 STXBP6Q8NFX7 210 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 OR7G2Q8NG99 324 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 OR52B6Q8NGF0 335 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 OR10R2Q8NGX6 335 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 OR51A7Q8NH64 312 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 PIGXQ8TBF5 258 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 SPPL2AQ8TCT8 520 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 RNASEH2CQ8TDP1 164 aaKnown RBP3.83□□□□□ -1.8
CD55-208ENST00000476590 ABHD3Q8WU67 409 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 ORAOV1Q8WV07 137 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 TMEM234Q8WY98 164 aa3.83□□□□□ -1.8
CD55-208ENST00000476590 KTI12Q96EK9 354 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms