RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 ZNF780AO75290 641 aaPredicted RBP4.19□□□□□ -1.74
VPS50-212ENST00000476413 OXSR1O95747 527 aaPredicted RBP4.19□□□□□ -1.74
VPS50-212ENST00000476413 KRTAP1-4P0C5Y4 121 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 UQCRFS1P1P0C7P4 283 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 NCF2P19878 526 aaPredicted RBP4.19□□□□□ -1.74
VPS50-212ENST00000476413 ZBTB25P24278 435 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 ANXA13P27216 316 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 RFC4P35249 363 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 PLD1Q13393 1074 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 ZNF77Q15935 545 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 RUFY3Q7L099 469 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 GDPD3Q7L5L3 318 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 CDR2LQ86X02 465 aaPredicted RBP4.19□□□□□ -1.74
VPS50-212ENST00000476413 ZNF584Q8IVC4 421 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 NKAPP1Q8N9T2 125 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 SDR9C7Q8NEX9 313 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 AKR7LQ8NHP1 331 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 BRSK1Q8TDC3 778 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 SETD7Q8WTS6 366 aaKnown RBP4.19□□□□□ -1.74
VPS50-212ENST00000476413 CMTM7Q96FZ5 175 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 FMO2Q99518 471 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 OR51J1Q9H342 316 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 NIPAL2Q9H841 368 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 NMRAL1Q9HBL8 299 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 ZFP14Q9HCL3 533 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 TM9SF3Q9HD45 589 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 BFARQ9NZS9 450 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 B4GALT7Q9UBV7 327 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 ABCG2Q9UNQ0 655 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 V9GY05 133 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 NOTCH3Q9UM47 2321 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 PHF3Q92576 2039 aaKnown RBP4.19□□□□□ -1.74
VPS50-212ENST00000476413 ZNF716A6NP11 495 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 LOC110117498-PIK3R3F6TDL0 507 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 LY6G6DO95868 133 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 ZNF735P0CB33 412 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 SLC2A3P11169 496 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 ATP6V1B2P21281 511 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 EPS15P42566 896 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 KIR2DS4P43632 304 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 GSSP48637 474 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 TPMTP51580 245 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 PPIL2Q13356 520 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 OR5I1Q13606 314 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 PARP15Q460N3 678 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 EOGTQ5NDL2 527 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 PRAMEF5Q5TYX0 476 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 C1orf146Q5VVC0 180 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 PRAMEF6Q5VXH4 476 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 RFLNAQ6ZTI6 216 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 TAS2R42Q7RTR8 314 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 ECHDC2Q86YB7 292 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 TGIF2LYQ8IUE0 185 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 OR2L3Q8NG85 312 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 OR2AP1Q8NGE2 309 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 OR9K2Q8NGE7 335 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 OR1L6Q8NGR2 347 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.18□□□□□ -1.74
VPS50-212ENST00000476413 PANX2Q96RD6 677 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 SELENOIQ9C0D9 397 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 NMRK1Q9NWW6 199 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 IL17CQ9P0M4 197 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 PISDQ9UG56 409 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 KCNIP3Q9Y2W7 256 aa4.18□□□□□ -1.74
VPS50-212ENST00000476413 A0A1B0GVY2 172 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 FAM231BA6NCW3 169 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 A6NIZ1 184 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 HDAC3O15379 428 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 UPK3AO75631 287 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 SNAPINO95295 136 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 CXCR2P25025 360 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 CD1CP29017 333 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 STX17P56962 302 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 RAP1BP61224 184 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 CSNK1G2P78368 415 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 DGUOKQ16854 277 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 C1orf100Q5SVJ3 147 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 HSDL2Q6YN16 418 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 ZNF100Q8IYN0 542 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 SPAG16Q8N0X2 631 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 UBE2J2Q8N2K1 259 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 OR56B2PQ8NGI1 322 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 TPD52L3Q96J77 140 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 ZNF641Q96N77 438 aaPredicted RBP4.17□□□□□ -1.74
VPS50-212ENST00000476413 EBF4Q9BQW3 602 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 PPA2Q9H2U2 334 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 RNF167Q9H6Y7 350 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 SH2D2AQ9NP31 389 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 ETNK2Q9NVF9 386 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 TREM2Q9NZC2 230 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 SLC7A8Q9UHI5 535 aa4.17□□□□□ -1.74
VPS50-212ENST00000476413 PPIAL4EA0A075B759 164 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 NSG1A0A0A6YYJ2 146 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 A0A0G2JLM5 398 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 A0A0J9YXY3 114 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 PSMB11A5LHX3 300 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 OR5B21A6NL26 309 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 CCDC169A6NNP5 214 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 HIP1O00291 1037 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 PPIAL4FP0DN26 164 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms