RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 AVPR2P30518 371 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 MMP15P51511 669 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 WNT3P56703 355 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 DAOAP59103 153 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 SNRPGP62308 76 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 FAM189BP81408 668 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF345Q14585 488 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 CNN3Q15417 329 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 TTLL9Q3SXZ7 439 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 SLC39A12Q504Y0 691 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 ARTNQ5T4W7 220 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 NKAIN2Q5VXU1 208 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF626Q68DY1 528 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 TMEM71Q6P5X7 295 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 MPZL3Q6UWV2 235 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 ABHD15Q6UXT9 468 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 TRMT1LQ7Z2T5 733 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 C6orf120Q7Z4R8 191 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 WDR53Q7Z5U6 358 aaPredicted RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 FAM185AQ8N0U4 392 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 PNLDC1Q8NA58 520 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 FAM98AQ8NCA5 519 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 IL31RAQ8NI17 732 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 RXFP2Q8WXD0 754 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF845Q96IR2 970 aaPredicted RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 TPD52L3Q96J77 140 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF514Q96K75 400 aaPredicted RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 AMDHD1Q96NU7 426 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 KLHL5Q96PQ7 755 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 PTPN18Q99952 460 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 NRIP2Q9BQI9 281 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 UTP23Q9BRU9 249 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 WDR11Q9BZH6 1224 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 NMNAT1Q9HAN9 279 aaPredicted RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 APOBEC3GQ9HC16 384 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 ASF1BQ9NVP2 202 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 TAS2R5Q9NYW4 299 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 DNAJB11Q9UBS4 358 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 CCNL1Q9UK58 526 aaPredicted RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 TMED3Q9Y3Q3 217 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 RPL36Q9Y3U8 105 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 ATG4BQ9Y4P1 393 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 PTGDR2Q9Y5Y4 395 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF726A6NNF4 738 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 AHRRA9YTQ3 701 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 PQBP1O60828 265 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 DDNO94850 711 aaPredicted RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 NFATC1O95644 943 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF682O95780 498 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 C8GP07360 202 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 NR2F1P10589 423 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 PSMB1P20618 241 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 GALP22466 123 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 HTR2CP28335 458 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 GABRR2P28476 465 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 PTPN6P29350 595 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 SHC1P29353 583 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 APOBEC3AP31941 199 aaPredicted RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 CCR1P32246 355 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 RPL3P39023 403 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 SLC6A9P48067 706 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 RAB8AP61006 207 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 VLDLRP98155 873 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 HGFACQ04756 655 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 ABHD18Q0P651 414 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 SNTB2Q13425 540 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 TRA2AQ13595 282 aaKnown RBP eCLIP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 NDUFA9Q16795 377 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 RAB6CQ53S08 254 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 OR10K2Q6IF99 312 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 EIF5AL1Q6IS14 154 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 RGMBQ6NW40 437 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 MTFR2Q6P444 385 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 NCEH1Q6PIU2 408 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 Q6ZVL8 140 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 PTCHD4Q6ZW05 846 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 RPS27LQ71UM5 84 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 NRROSQ86YC3 692 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 PIGXQ8TBF5 258 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 ING5Q8WYH8 240 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF707Q96C28 371 aaPredicted RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 ECHDC3Q96DC8 303 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 SMARCD1Q96GM5 515 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 BOD1Q96IK1 185 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 SGCZQ96LD1 299 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 FCRL4Q96PJ5 515 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF426Q9BUY5 554 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 RIOK2Q9BVS4 552 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 TKTL2Q9H0I9 626 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 RAB6CQ9H0N0 254 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 SPHK2Q9NRA0 654 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 CA10Q9NS85 328 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 APOBEC3BQ9UH17 382 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 AAR2Q9Y312 384 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 PHIPQ8WWQ0 1821 aa4.71□□□□□ -1.65
TMEM39A-206ENST00000473684 UBE2QL1A1L167 161 aa4.71□□□□□ -1.66
TMEM39A-206ENST00000473684 OR5H15A6NDH6 313 aa4.71□□□□□ -1.66
TMEM39A-206ENST00000473684 OR5H1A6NKK0 313 aa4.71□□□□□ -1.66
TMEM39A-206ENST00000473684 A6NLC8 198 aa4.71□□□□□ -1.66
TMEM39A-206ENST00000473684 ZNF587BE7ETH6 402 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms