RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 CBFBQ13951 182 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 PPA1Q15181 289 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 MAPK14Q16539 360 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 NDUFA9Q16795 377 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 HYAL4Q2M3T9 481 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 DCAF4L1Q3SXM0 396 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 SCGB2B2Q4G0G5 96 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 ZNF385BQ569K4 471 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 ELFN2Q5R3F8 820 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 POMZP3Q6PJE2 187 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 PRSS55Q6UWB4 352 aaPredicted RBP3.9□□□□□ -1.78
VPS50-210ENST00000471188 C6orf120Q7Z4R8 191 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 SCD5Q86SK9 330 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 PARGQ86W56 976 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 LSRQ86X29 649 aaPredicted RBP3.9□□□□□ -1.78
VPS50-210ENST00000471188 NRROSQ86YC3 692 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 CFAP52Q8N1V2 620 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 NLGN1Q8N2Q7 840 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 SLC44A3Q8N4M1 653 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 KCNRGQ8N5I3 272 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 SIRT6Q8N6T7 355 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 ACBD4Q8NC06 268 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 OR4A4PQ8NGN8 299 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 OSTF1Q92882 214 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 TMEM19Q96HH6 336 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 PPP1R16AQ96I34 528 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 FAM46AQ96IP4 442 aaKnown RBP3.9□□□□□ -1.78
VPS50-210ENST00000471188 GAL3ST4Q96RP7 486 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 SLC25A18Q9H1K4 315 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 PRDM13Q9H4Q3 707 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 MED20Q9H944 212 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 SYNPO2LQ9H987 977 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 RNF122Q9H9V4 155 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 BCO1Q9HAY6 547 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 IL21RQ9HBE5 538 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 OSER1Q9NX31 292 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 RCC2Q9P258 522 aaKnown RBP3.9□□□□□ -1.78
VPS50-210ENST00000471188 TRPC4Q9UBN4 977 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 LAMP5Q9UJQ1 280 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 PIN4Q9Y237 131 aaKnown RBP3.9□□□□□ -1.78
VPS50-210ENST00000471188 PCDHB1Q9Y5F3 818 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 NPFFR2Q9Y5X5 522 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 SIP14410 1827 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 TRAV14DV4A0A0A6YYC5 116 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 NPIPB9F8W1W9 429 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 RBBP9O75884 186 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 C22orf31O95567 290 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 MT-ND5P03915 603 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 ARAFP10398 606 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 TPT1P13693 172 aaKnown RBP3.9□□□□□ -1.78
VPS50-210ENST00000471188 ADRB3P13945 408 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 GTF2F2P13984 249 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 OPRD1P41143 372 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 CSNK1EP49674 416 aaKnown RBP3.9□□□□□ -1.78
VPS50-210ENST00000471188 NUTF2P61970 127 aaKnown RBP3.9□□□□□ -1.78
VPS50-210ENST00000471188 CDK5Q00535 292 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 RING1Q06587 406 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 EFEMP1Q12805 493 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 ZNF239Q16600 458 aaKnown RBP3.9□□□□□ -1.78
VPS50-210ENST00000471188 LIPNQ5VXI9 398 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 OR2A2Q6IF42 318 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 ETFRF1Q6IPR1 90 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 ZNF529Q6P280 563 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 FAM111BQ6SJ93 734 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 ACOT7LQ6ZUV0 252 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 GAREM2Q75VX8 874 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 OLIG3Q7RTU3 272 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 PPP1R3BQ86XI6 285 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 UMODL1-AS1Q8N2C9 162 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 C17orf47Q8NEP4 570 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 SYNPRQ8TBG9 265 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 CD300LFQ8TDQ1 290 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 XAGE5Q8WWM1 108 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 RGP1Q92546 391 aaPredicted RBP3.9□□□□□ -1.78
VPS50-210ENST00000471188 GHSRQ92847 366 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 PHYHIPLQ96FC7 376 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 THOC3Q96J01 351 aaKnown RBP3.9□□□□□ -1.78
VPS50-210ENST00000471188 C4orf36Q96KX1 117 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 ASB16Q96NS5 453 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 AMDHD1Q96NU7 426 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 IP6K3Q96PC2 410 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 S100A13Q99584 98 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 WFDC6Q9BQY6 131 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 C2orf88Q9BSF0 95 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 CHST6Q9GZX3 395 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 WNT5BQ9H1J7 359 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 P2RY12Q9H244 342 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 SGK2Q9HBY8 427 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 MIEF1Q9NQG6 463 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 SLC13A4Q9UKG4 626 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 ZDHHC8Q9ULC8 765 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 NYNRINQ9P2P1 1898 aaKnown RBP3.9□□□□□ -1.79
VPS50-210ENST00000471188 A0A0G2JK05 382 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 TMEM272A0A1B0GTI8 110 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 C7orf77A4D0Y5 90 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 EEF1E1-BLOC1S5C9J1V9 151 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 MCIDASD6RGH6 385 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 ACOT7O00154 380 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 PSMD9O00233 223 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 PPP1R2P9O14990 202 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms