RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 A0A0G2JPF8 293 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 AQP7P3A6NL99 342 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 A8MVM7 634 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 HNRNPCL2B2RXH8 293 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 HNRNPCL3B7ZW38 293 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 M0R1B8 84 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 SSX4O60224 188 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 HNRNPCL1O60812 293 aaKnown RBP12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 NPIPB7O75200 414 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 HNRNPCL4P0DMR1 293 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 MPGP29372 298 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 FABP6P51161 128 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 CRISP3P54108 245 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 DSTNP60981 165 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 MAGOHP61326 146 aaKnown RBP12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 DMTNQ08495 405 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 BNIP2Q12982 314 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 OR7A5Q15622 319 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 NRF1Q16656 503 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 LIN52Q52LA3 116 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 RNF220Q5VTB9 566 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 C9orf135Q5VTT2 229 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 AAED1Q7RTV5 226 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 DEPDC4Q8N2C3 294 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 MUC15Q8N387 334 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 C17orf78Q8N4C9 275 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 OR9K2Q8NGE7 335 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 OR9I1Q8NGQ6 314 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 AURKBQ96GD4 344 aaPredicted RBP12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 ITCHQ96J02 903 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 ADAD1Q96M93 576 aaKnown RBP12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 CACNG6Q9BXT2 260 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 ZNF232Q9UNY5 417 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 ZNF443Q9Y2A4 671 aaPredicted RBP12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 AMDHD2Q9Y303 409 aa12.96□□□□□ -0.33
SDCCAG3-209ENST00000468963 STAB1Q9NY15 2570 aa12.96□□□□□ -0.34
SDCCAG3-209ENST00000468963 YLPM1P49750 1951 aaKnown RBP12.96□□□□□ -0.34
SDCCAG3-209ENST00000468963 ARFGEF3Q5TH69 2177 aa12.96□□□□□ -0.34
SDCCAG3-209ENST00000468963 A0A096LNT2 108 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 KLF11O14901 512 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 UBDO15205 165 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 CD5LO43866 347 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 ANP32DO95626 131 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 BCHEP06276 602 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 POLR2JP52435 117 aaKnown RBP12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 COPZ1P61923 177 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 TGFBR3Q03167 851 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 LARS2Q15031 903 aaKnown RBP12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 ZNF544Q6NX49 715 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 FBXL14Q8N1E6 418 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 CADM2Q8N3J6 435 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 POMGNT2Q8NAT1 580 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 GTF2H4Q92759 462 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 VPS33AQ96AX1 596 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 TMEM19Q96HH6 336 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 RHNO1Q9BSD3 238 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 SPATA9Q9BWV2 254 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 RSPO3Q9BXY4 272 aaPredicted RBP12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 PAIP1Q9H074 479 aaKnown RBP12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 RMND5AQ9H871 391 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 TMBIM4Q9HC24 238 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 BCL2L10Q9HD36 194 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 THUMPD1Q9NXG2 353 aaKnown RBP12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 POU2F3Q9UKI9 436 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 PCDHB14Q9Y5E9 798 aa12.95□□□□□ -0.34
SDCCAG3-209ENST00000468963 IGHV4-30-2A0A087WSY4 118 aa12.94□□□□□ -0.34
SDCCAG3-209ENST00000468963 FAM234BA2RU67 622 aa12.94□□□□□ -0.34
SDCCAG3-209ENST00000468963 TLX2O43763 284 aaPredicted RBP12.94□□□□□ -0.34
SDCCAG3-209ENST00000468963 NUDT7P0C024 238 aa12.94□□□□□ -0.34
SDCCAG3-209ENST00000468963 BMP2P12643 396 aa12.94□□□□□ -0.34
SDCCAG3-209ENST00000468963 HOXB9P17482 250 aaPredicted RBP12.94□□□□□ -0.34
SDCCAG3-209ENST00000468963 DSCR9P59020 149 aa12.94□□□□□ -0.34
SDCCAG3-209ENST00000468963 PRPS1P60891 318 aa12.94□□□□□ -0.34
SDCCAG3-209ENST00000468963 RGNQ15493 299 aa12.94□□□□□ -0.34
SDCCAG3-209ENST00000468963 RPS26P11Q5JNZ5 115 aaPredicted RBP12.94□□□□□ -0.34
SDCCAG3-209ENST00000468963 C1orf140Q5VVS0 124 aa12.94□□□□□ -0.34
SDCCAG3-209ENST00000468963 TMEM225Q6GV28 225 aa12.94□□□□□ -0.34
SDCCAG3-209ENST00000468963 EPGNQ6UW88 154 aa12.94□□□□□ -0.34
SDCCAG3-209ENST00000468963 CREB3L2Q70SY1 520 aa12.94□□□□□ -0.34
SDCCAG3-209ENST00000468963 SERPINA11Q86U17 422 aa12.94□□□□□ -0.34
SDCCAG3-209ENST00000468963 EPHX4Q8IUS5 362 aa12.94□□□□□ -0.34
SDCCAG3-209ENST00000468963 STK35Q8TDR2 534 aa12.94□□□□□ -0.34
SDCCAG3-209ENST00000468963 C3orf49Q96BT1 292 aa12.94□□□□□ -0.34
SDCCAG3-209ENST00000468963 NKIRAS1Q9NYS0 192 aa12.94□□□□□ -0.34
SDCCAG3-209ENST00000468963 IFT52Q9Y366 437 aa12.94□□□□□ -0.34
SDCCAG3-209ENST00000468963 ATP23Q9Y6H3 246 aa12.94□□□□□ -0.34
SDCCAG3-209ENST00000468963 ELOA3DA6NLF2 546 aaPredicted RBP12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 TMEM229AB2RXF0 380 aa12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 FTCDNL1E5RQL4 147 aa12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 CLIC1O00299 241 aa12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 GPRIN2O60269 458 aa12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 VAMP5O95183 116 aa12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 TP53P04637 393 aaPredicted RBP12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 APOBEC3AP31941 199 aaPredicted RBP12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 MRPL19P49406 292 aaKnown RBP12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 RAB35Q15286 201 aa12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 MST1LQ2TV78 715 aa12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 ELOA3BQ3SY89 546 aa12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 PRAMEF8Q5VWM4 474 aa12.93□□□□□ -0.34
SDCCAG3-209ENST00000468963 PRAMEF7Q5VXH5 474 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms