RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CHRM4P08173 479 aa18.81■□□□□ 0.6
CPNE1-220ENST00000458038 VSNL1P62760 191 aa18.81■□□□□ 0.6
CPNE1-220ENST00000458038 CEACAM7Q14002 265 aa18.81■□□□□ 0.6
CPNE1-220ENST00000458038 MRPL2Q5T653 305 aaKnown RBP18.81■□□□□ 0.6
CPNE1-220ENST00000458038 TMEM225Q6GV28 225 aa18.81■□□□□ 0.6
CPNE1-220ENST00000458038 TMEM99Q8N816 258 aa18.81■□□□□ 0.6
CPNE1-220ENST00000458038 ZIC4Q8N9L1 334 aa18.81■□□□□ 0.6
CPNE1-220ENST00000458038 NUF2Q9BZD4 464 aa18.81■□□□□ 0.6
CPNE1-220ENST00000458038 MEAF6Q9HAF1 191 aa18.81■□□□□ 0.6
CPNE1-220ENST00000458038 CALML5Q9NZT1 146 aa18.81■□□□□ 0.6
CPNE1-220ENST00000458038 MOKQ9UQ07 419 aa18.81■□□□□ 0.6
CPNE1-220ENST00000458038 ZC3H12DA2A288 527 aaKnown RBP18.8■□□□□ 0.6
CPNE1-220ENST00000458038 ATP6V1G2-DDX39BF2Z307 99 aa18.8■□□□□ 0.6
CPNE1-220ENST00000458038 KRT75O95678 551 aa18.8■□□□□ 0.6
CPNE1-220ENST00000458038 PGRP06401 933 aa18.8■□□□□ 0.6
CPNE1-220ENST00000458038 COPZ1P61923 177 aa18.8■□□□□ 0.6
CPNE1-220ENST00000458038 SNRPD2P62316 118 aaKnown RBP18.8■□□□□ 0.6
CPNE1-220ENST00000458038 SLC25A3Q00325 362 aa18.8■□□□□ 0.6
CPNE1-220ENST00000458038 MST1LQ2TV78 715 aa18.8■□□□□ 0.6
CPNE1-220ENST00000458038 C3orf36Q3SXR2 165 aa18.8■□□□□ 0.6
CPNE1-220ENST00000458038 FAM166AQ6J272 317 aa18.8■□□□□ 0.6
CPNE1-220ENST00000458038 ZNF621Q6ZSS3 439 aa18.8■□□□□ 0.6
CPNE1-220ENST00000458038 SPATA19Q7Z5L4 167 aa18.8■□□□□ 0.6
CPNE1-220ENST00000458038 ZNF540Q8NDQ6 660 aa18.8■□□□□ 0.6
CPNE1-220ENST00000458038 AENQ8WTP8 325 aaKnown RBP18.8■□□□□ 0.6
CPNE1-220ENST00000458038 OR52E6Q96RD3 313 aa18.8■□□□□ 0.6
CPNE1-220ENST00000458038 SORT1Q99523 831 aa18.8■□□□□ 0.6
CPNE1-220ENST00000458038 PIMREGQ9BSJ6 248 aa18.8■□□□□ 0.6
CPNE1-220ENST00000458038 KATNB1Q9BVA0 655 aa18.8■□□□□ 0.6
CPNE1-220ENST00000458038 TAPBPLQ9BX59 468 aa18.8■□□□□ 0.6
CPNE1-220ENST00000458038 C20orf27Q9GZN8 174 aa18.8■□□□□ 0.6
CPNE1-220ENST00000458038 A0A096LPI6 279 aa18.79■□□□□ 0.6
CPNE1-220ENST00000458038 LOC390937A0A1W2PQ73 354 aa18.79■□□□□ 0.6
CPNE1-220ENST00000458038 CDHR4A6H8M9 788 aa18.79■□□□□ 0.6
CPNE1-220ENST00000458038 VWC2LB2RUY7 222 aa18.79■□□□□ 0.6
CPNE1-220ENST00000458038 PDE5AO76074 875 aa18.79■□□□□ 0.6
CPNE1-220ENST00000458038 AKR7A3O95154 331 aa18.79■□□□□ 0.6
CPNE1-220ENST00000458038 CRYAAP02489 173 aa18.79■□□□□ 0.6
CPNE1-220ENST00000458038 HOXB1P14653 301 aaPredicted RBP18.79■□□□□ 0.6
CPNE1-220ENST00000458038 OR7A5Q15622 319 aa18.79■□□□□ 0.6
CPNE1-220ENST00000458038 WBP2NLQ6ICG8 309 aa18.79■□□□□ 0.6
CPNE1-220ENST00000458038 TRIM44Q96DX7 344 aaPredicted RBP18.79■□□□□ 0.6
CPNE1-220ENST00000458038 FBXO17Q96EF6 278 aa18.79■□□□□ 0.6
CPNE1-220ENST00000458038 AURKBQ96GD4 344 aaPredicted RBP18.79■□□□□ 0.6
CPNE1-220ENST00000458038 ZNF385AQ96PM9 386 aaKnown RBP18.79■□□□□ 0.6
CPNE1-220ENST00000458038 SLC38A2Q96QD8 506 aa18.79■□□□□ 0.6
CPNE1-220ENST00000458038 ZBTB18Q99592 522 aa18.79■□□□□ 0.6
CPNE1-220ENST00000458038 ARMC7Q9H6L4 198 aa18.79■□□□□ 0.6
CPNE1-220ENST00000458038 KCNS2Q9ULS6 477 aa18.79■□□□□ 0.6
CPNE1-220ENST00000458038 A8MVM7 634 aa18.78■□□□□ 0.6
CPNE1-220ENST00000458038 ZNF587BE7ETH6 402 aa18.78■□□□□ 0.6
CPNE1-220ENST00000458038 RGS16O15492 202 aaPredicted RBP18.78■□□□□ 0.6
CPNE1-220ENST00000458038 CDH2P19022 906 aaPredicted RBP18.78■□□□□ 0.6
CPNE1-220ENST00000458038 SERPINF1P36955 418 aa18.78■□□□□ 0.6
CPNE1-220ENST00000458038 NR4A2P43354 598 aa18.78■□□□□ 0.6
CPNE1-220ENST00000458038 STX3Q13277 289 aa18.78■□□□□ 0.6
CPNE1-220ENST00000458038 KRT71Q3SY84 523 aa18.78■□□□□ 0.6
CPNE1-220ENST00000458038 LIN52Q52LA3 116 aa18.78■□□□□ 0.6
CPNE1-220ENST00000458038 GPAT4Q86UL3 456 aa18.78■□□□□ 0.6
CPNE1-220ENST00000458038 FAM169BQ8N8A8 192 aa18.78■□□□□ 0.6
CPNE1-220ENST00000458038 GLB1L3Q8NCI6 653 aaPredicted RBP18.78■□□□□ 0.6
CPNE1-220ENST00000458038 MAGEE2Q8TD90 523 aaPredicted RBP18.78■□□□□ 0.6
CPNE1-220ENST00000458038 TEX37Q96LM6 180 aa18.78■□□□□ 0.6
CPNE1-220ENST00000458038 AIG1Q9NVV5 245 aa18.78■□□□□ 0.6
CPNE1-220ENST00000458038 P2RX2Q9UBL9 471 aa18.78■□□□□ 0.6
CPNE1-220ENST00000458038 ZNF232Q9UNY5 417 aa18.78■□□□□ 0.6
CPNE1-220ENST00000458038 B9A039 149 aa18.77■□□□□ 0.6
CPNE1-220ENST00000458038 ZNF16P17020 682 aaPredicted RBP18.77■□□□□ 0.6
CPNE1-220ENST00000458038 SRD5A1P18405 259 aa18.77■□□□□ 0.6
CPNE1-220ENST00000458038 HNF1AP20823 631 aa18.77■□□□□ 0.6
CPNE1-220ENST00000458038 ACAA2P42765 397 aaKnown RBP18.77■□□□□ 0.6
CPNE1-220ENST00000458038 UBE2NP61088 152 aaKnown RBP18.77■□□□□ 0.6
CPNE1-220ENST00000458038 UFM1P61960 85 aa18.77■□□□□ 0.6
CPNE1-220ENST00000458038 TBRG1Q3YBR2 411 aa18.77■□□□□ 0.6
CPNE1-220ENST00000458038 HIKESHIQ53FT3 197 aa18.77■□□□□ 0.6
CPNE1-220ENST00000458038 ANKK1Q8NFD2 765 aa18.77■□□□□ 0.6
CPNE1-220ENST00000458038 OR1K1Q8NGR3 316 aa18.77■□□□□ 0.6
CPNE1-220ENST00000458038 CA10Q9NS85 328 aa18.77■□□□□ 0.6
CPNE1-220ENST00000458038 THUMPD1Q9NXG2 353 aaKnown RBP18.77■□□□□ 0.6
CPNE1-220ENST00000458038 RASD1Q9Y272 281 aa18.77■□□□□ 0.6
CPNE1-220ENST00000458038 ARPC4-TTLL3A0A0A6YYG9 625 aa18.76■□□□□ 0.59
CPNE1-220ENST00000458038 IGHV1-18A0A0C4DH31 117 aa18.76■□□□□ 0.59
CPNE1-220ENST00000458038 VSTM5A8MXK1 200 aa18.76■□□□□ 0.59
CPNE1-220ENST00000458038 CRISP3P54108 245 aa18.76■□□□□ 0.59
CPNE1-220ENST00000458038 SH3BGRP55822 239 aaPredicted RBP18.76■□□□□ 0.59
CPNE1-220ENST00000458038 LARS2Q15031 903 aaKnown RBP18.76■□□□□ 0.59
CPNE1-220ENST00000458038 COX20Q5RI15 118 aa18.76■□□□□ 0.59
CPNE1-220ENST00000458038 WDR93Q6P2C0 686 aa18.76■□□□□ 0.59
CPNE1-220ENST00000458038 CREB3L2Q70SY1 520 aa18.76■□□□□ 0.59
CPNE1-220ENST00000458038 SLC46A3Q7Z3Q1 461 aa18.76■□□□□ 0.59
CPNE1-220ENST00000458038 MREGQ8N565 214 aa18.76■□□□□ 0.59
CPNE1-220ENST00000458038 OR4F15Q8NGB8 312 aa18.76■□□□□ 0.59
CPNE1-220ENST00000458038 OR52P1PQ8NH57 321 aa18.76■□□□□ 0.59
CPNE1-220ENST00000458038 SORCS2Q96PQ0 1159 aa18.76■□□□□ 0.59
CPNE1-220ENST00000458038 LINC00470Q9BZP3 86 aa18.76■□□□□ 0.59
CPNE1-220ENST00000458038 CACYBPQ9HB71 228 aaKnown RBP18.76■□□□□ 0.59
CPNE1-220ENST00000458038 RLIMQ9NVW2 624 aa18.76■□□□□ 0.59
CPNE1-220ENST00000458038 CRNNQ9UBG3 495 aaPredicted RBP18.76■□□□□ 0.59
CPNE1-220ENST00000458038 LOC100289279A0A1B0GTE1 492 aa18.75■□□□□ 0.59
CPNE1-220ENST00000458038 RFXANKO14593 260 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms