RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 ALG10BQ5I7T1 473 aa15.37■□□□□ 0.05
USP39-208ENST00000455732 C8orf82Q6P1X6 216 aaPredicted RBP15.37■□□□□ 0.05
USP39-208ENST00000455732 Q6ZT83 130 aa15.37■□□□□ 0.05
USP39-208ENST00000455732 C22orf34Q6ZV56 151 aa15.37■□□□□ 0.05
USP39-208ENST00000455732 CCDC103Q8IW40 242 aa15.37■□□□□ 0.05
USP39-208ENST00000455732 ELOA3Q8NG57 546 aa15.37■□□□□ 0.05
USP39-208ENST00000455732 SLC38A4Q969I6 547 aa15.37■□□□□ 0.05
USP39-208ENST00000455732 CMTM5Q96DZ9 223 aa15.37■□□□□ 0.05
USP39-208ENST00000455732 WFDC6Q9BQY6 131 aa15.37■□□□□ 0.05
USP39-208ENST00000455732 MED18Q9BUE0 208 aa15.37■□□□□ 0.05
USP39-208ENST00000455732 SF3B5Q9BWJ5 86 aaKnown RBP15.37■□□□□ 0.05
USP39-208ENST00000455732 TAPBPLQ9BX59 468 aa15.37■□□□□ 0.05
USP39-208ENST00000455732 KLHL4Q9C0H6 718 aa15.37■□□□□ 0.05
USP39-208ENST00000455732 PIF1Q9H611 641 aa15.37■□□□□ 0.05
USP39-208ENST00000455732 TMEM27Q9HBJ8 222 aa15.37■□□□□ 0.05
USP39-208ENST00000455732 ZNF226Q9NYT6 803 aa15.37■□□□□ 0.05
USP39-208ENST00000455732 AQP7P3A6NL99 342 aa15.36■□□□□ 0.05
USP39-208ENST00000455732 FTCDNL1E5RQL4 147 aa15.36■□□□□ 0.05
USP39-208ENST00000455732 M0R3H8 397 aa15.36■□□□□ 0.05
USP39-208ENST00000455732 CASKO14936 926 aa15.36■□□□□ 0.05
USP39-208ENST00000455732 SIAH2O43255 324 aa15.36■□□□□ 0.05
USP39-208ENST00000455732 AHSA1O95433 338 aa15.36■□□□□ 0.05
USP39-208ENST00000455732 CRYGSP22914 178 aa15.36■□□□□ 0.05
USP39-208ENST00000455732 PRDX6P30041 224 aa15.36■□□□□ 0.05
USP39-208ENST00000455732 SLC17A1Q14916 467 aa15.36■□□□□ 0.05
USP39-208ENST00000455732 P2RY6Q15077 328 aa15.36■□□□□ 0.05
USP39-208ENST00000455732 OR1Q1Q15612 314 aa15.36■□□□□ 0.05
USP39-208ENST00000455732 OR7A5Q15622 319 aa15.36■□□□□ 0.05
USP39-208ENST00000455732 OTUD3Q5T2D3 398 aaPredicted RBP15.36■□□□□ 0.05
USP39-208ENST00000455732 ZNF613Q6PF04 617 aa15.36■□□□□ 0.05
USP39-208ENST00000455732 LSRQ86X29 649 aaPredicted RBP15.36■□□□□ 0.05
USP39-208ENST00000455732 OR2T12Q8NG77 320 aa15.36■□□□□ 0.05
USP39-208ENST00000455732 MFSD8Q8NHS3 518 aa15.36■□□□□ 0.05
USP39-208ENST00000455732 SLC47A1Q96FL8 570 aa15.36■□□□□ 0.05
USP39-208ENST00000455732 HOPXQ9BPY8 73 aaPredicted RBP15.36■□□□□ 0.05
USP39-208ENST00000455732 PTDSS2Q9BVG9 487 aa15.36■□□□□ 0.05
USP39-208ENST00000455732 HDHD5Q9BXW7 423 aa15.36■□□□□ 0.05
USP39-208ENST00000455732 PCDHAC1Q9H158 963 aa15.36■□□□□ 0.05
USP39-208ENST00000455732 EFCAB1Q9HAE3 211 aa15.36■□□□□ 0.05
USP39-208ENST00000455732 CCM2LQ9NUG4 571 aaPredicted RBP15.36■□□□□ 0.05
USP39-208ENST00000455732 NOSIPQ9Y314 301 aaKnown RBP15.36■□□□□ 0.05
USP39-208ENST00000455732 RAI1Q7Z5J4 1906 aaPredicted RBP15.36■□□□□ 0.05
USP39-208ENST00000455732 MTORP42345 2549 aa15.36■□□□□ 0.05
USP39-208ENST00000455732 IGKV1D-42A0A075B6H8 117 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 A0A087WUJ7 227 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 DEFB108AA8MXU0 73 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 AIM2O14862 343 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 VAMP5O95183 116 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 P2RY4P51582 365 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 ART1P52961 327 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 POU4F3Q15319 338 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 NPTX1Q15818 432 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 FBXW10Q5XX13 1052 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 PAMR1Q6UXH9 720 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 PIGWQ7Z7B1 504 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 CXorf67Q86X51 503 aaPredicted RBP15.35■□□□□ 0.05
USP39-208ENST00000455732 SLC15A3Q8IY34 581 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 TMEM99Q8N816 258 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 STEAP2Q8NFT2 490 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 OR6T1Q8NGN1 323 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 OR6S1Q8NH40 331 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 SLC26A7Q8TE54 656 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 TMEM45BQ96B21 275 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 ZNF775Q96BV0 537 aaPredicted RBP15.35■□□□□ 0.05
USP39-208ENST00000455732 USB1Q9BQ65 265 aaKnown RBP15.35■□□□□ 0.05
USP39-208ENST00000455732 PRR14Q9BWN1 585 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 ACTR6Q9GZN1 396 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 CMTM6Q9NX76 183 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 SELENONQ9NZV5 590 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 USP22Q9UPT9 525 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 SLC9A8Q9Y2E8 581 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 PLEKHA6Q9Y2H5 1048 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 FLVCR1Q9Y5Y0 555 aa15.35■□□□□ 0.05
USP39-208ENST00000455732 DSCAMO60469 2012 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 CCT8L1PA6NM43 557 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 OR2T1O43869 369 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 AKR7A3O95154 331 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 IFNA14P01570 189 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 COX5AP20674 150 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 EDNRAP25101 427 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 SFRP5Q5T4F7 317 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 FAM69AQ5T7M9 428 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 ZNF100Q8IYN0 542 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 MICU2Q8IYU8 434 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 OR4D11Q8NGI4 311 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 APH1AQ96BI3 265 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 KTI12Q96EK9 354 aaPredicted RBP15.34■□□□□ 0.05
USP39-208ENST00000455732 MCHR1Q99705 422 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 FOXC2Q99958 501 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 CXXC4Q9H2H0 198 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 ADPRHL2Q9NX46 363 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 C6orf203Q9P0P8 240 aaPredicted RBP15.34■□□□□ 0.05
USP39-208ENST00000455732 MALT1Q9UDY8 824 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 PRSS50Q9UI38 385 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 BAG5Q9UL15 447 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 ARL2BPQ9Y2Y0 163 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 ZFHX3Q15911 3703 aa15.34■□□□□ 0.05
USP39-208ENST00000455732 TRAV36DV7A0A075B6V5 113 aa15.33■□□□□ 0.04
USP39-208ENST00000455732 ELOVL7A1L3X0 281 aa15.33■□□□□ 0.04
USP39-208ENST00000455732 NDUFAB1O14561 156 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms