RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 MAMDC2Q7Z304 686 aaPredicted RBP13.14□□□□□ -0.31
SHANK2-210ENST00000449116 SLC46A3Q7Z3Q1 461 aa13.14□□□□□ -0.31
SHANK2-210ENST00000449116 FGD2Q7Z6J4 655 aa13.14□□□□□ -0.31
SHANK2-210ENST00000449116 MEX3DQ86XN8 651 aaKnown RBP13.14□□□□□ -0.31
SHANK2-210ENST00000449116 CHERPQ8IWX8 916 aaKnown RBP13.14□□□□□ -0.31
SHANK2-210ENST00000449116 PM20D2Q8IYS1 436 aa13.14□□□□□ -0.31
SHANK2-210ENST00000449116 ATG16L2Q8NAA4 619 aa13.14□□□□□ -0.31
SHANK2-210ENST00000449116 OR10D3Q8NH80 312 aa13.14□□□□□ -0.31
SHANK2-210ENST00000449116 GNPDA2Q8TDQ7 276 aa13.14□□□□□ -0.31
SHANK2-210ENST00000449116 LIPHQ8WWY8 451 aa13.14□□□□□ -0.31
SHANK2-210ENST00000449116 SLC25A36Q96CQ1 311 aa13.14□□□□□ -0.31
SHANK2-210ENST00000449116 MOGAT1Q96PD6 335 aa13.14□□□□□ -0.31
SHANK2-210ENST00000449116 FEVQ99581 238 aa13.14□□□□□ -0.31
SHANK2-210ENST00000449116 DGCR6LQ9BY27 220 aa13.14□□□□□ -0.31
SHANK2-210ENST00000449116 TIGARQ9NQ88 270 aa13.14□□□□□ -0.31
SHANK2-210ENST00000449116 NANSQ9NR45 359 aa13.14□□□□□ -0.31
SHANK2-210ENST00000449116 PAQR5Q9NXK6 330 aaPredicted RBP13.14□□□□□ -0.31
SHANK2-210ENST00000449116 ALKBH4Q9NXW9 302 aa13.14□□□□□ -0.31
SHANK2-210ENST00000449116 KIF17Q9P2E2 1029 aa13.14□□□□□ -0.31
SHANK2-210ENST00000449116 ZNF229Q9UJW7 825 aa13.14□□□□□ -0.31
SHANK2-210ENST00000449116 CAMK2AQ9UQM7 478 aa13.14□□□□□ -0.31
SHANK2-210ENST00000449116 DNPH1O43598 174 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 CXCL13O43927 109 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 FZD7O75084 574 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 SAGP10523 405 aaPredicted RBP13.13□□□□□ -0.31
SHANK2-210ENST00000449116 POU2F1P14859 743 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 FUT1P19526 365 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 PEX2P28328 305 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 GRPRP30550 384 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 EIF1AXP47813 144 aaKnown RBP13.13□□□□□ -0.31
SHANK2-210ENST00000449116 SLC9A3P48764 834 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 CARD18P57730 90 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 NUP107P57740 925 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 RAC3P60763 192 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 TSPAN31Q12999 210 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 C3AR1Q16581 482 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 WLSQ5T9L3 541 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 FBXW10Q5XX13 1052 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 FAHD1Q6P587 224 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 GFRALQ6UXV0 394 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 ZBTB49Q6ZSB9 765 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 CBR4Q8N4T8 237 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 OSTF1Q92882 214 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 GTPBP3Q969Y2 492 aaKnown RBP13.13□□□□□ -0.31
SHANK2-210ENST00000449116 GPA33Q99795 319 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 NIPSNAP1Q9BPW8 284 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 RBM4BQ9BQ04 359 aaKnown RBP13.13□□□□□ -0.31
SHANK2-210ENST00000449116 RBM4Q9BWF3 364 aaKnown RBP13.13□□□□□ -0.31
SHANK2-210ENST00000449116 ASPNQ9BXN1 380 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 ZNF556Q9HAH1 456 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 CORINQ9Y5Q5 1042 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 DNAJC13O75165 2243 aa13.13□□□□□ -0.31
SHANK2-210ENST00000449116 UNC119BA6NIH7 251 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 SOCS2O14508 198 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 CDC42EP2O14613 210 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 EI24O14681 340 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 ZNHIT1O43257 154 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 EIF1BO60739 113 aaKnown RBP13.12□□□□□ -0.31
SHANK2-210ENST00000449116 ASAH2BP0C7U1 165 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 GSTM3P21266 225 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 GSSP48637 474 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 DAPP51397 102 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 PPP2R2BQ00005 443 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 DAG1Q14118 895 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 SGCBQ16585 318 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 OGFRL1Q5TC84 451 aaPredicted RBP13.12□□□□□ -0.31
SHANK2-210ENST00000449116 LPCAT4Q643R3 524 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 CHMP1BQ7LBR1 199 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 LRRC17Q8N6Y2 441 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 SCAIQ8N9R8 606 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 OR5J2Q8NH18 312 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 DNAJC9Q8WXX5 260 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 CPNE4Q96A23 557 aaPredicted RBP13.12□□□□□ -0.31
SHANK2-210ENST00000449116 ZHX1-C8orf76Q96EF9 292 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 ZNF845Q96IR2 970 aaPredicted RBP13.12□□□□□ -0.31
SHANK2-210ENST00000449116 BBC3Q96PG8 261 aaPredicted RBP13.12□□□□□ -0.31
SHANK2-210ENST00000449116 SRXN1Q9BYN0 137 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 C8orf4Q9NR00 106 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 USE1Q9NZ43 259 aa13.12□□□□□ -0.31
SHANK2-210ENST00000449116 MPDZO75970 2070 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 M0R082 166 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 AKR7A3O95154 331 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 HIST1H2ABP04908 130 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 TPOP07202 933 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 ABOP16442 354 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 ALDH3A2P51648 485 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 AGFG1P52594 562 aaKnown RBP13.11□□□□□ -0.31
SHANK2-210ENST00000449116 RBPJQ06330 500 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 COX10Q12887 443 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 ZNF239Q16600 458 aaKnown RBP13.11□□□□□ -0.31
SHANK2-210ENST00000449116 LRRC36Q1X8D7 754 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 ANKDD1AQ495B1 522 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 GXYLT1Q4G148 440 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 ANKRD34AQ69YU3 496 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 KDM4DQ6B0I6 523 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 PAQR6Q6TCH4 344 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 CD300LDQ6UXZ3 194 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 HIST3H2AQ7L7L0 130 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 NANOGNBQ7Z5D8 188 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 OAFQ86UD1 273 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms