RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 RAI1Q7Z5J4 1906 aaPredicted RBP11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 OTOGQ6ZRI0 2925 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 PRRC2AP48634 2157 aaKnown RBP11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 BBIP1A8MTZ0 92 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 FTCDNL1E5RQL4 147 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 AHSA1O95433 338 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 C8BP07358 591 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 PNMTP11086 282 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 COX5AP20674 150 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 PCGF2P35227 344 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 RPS5P46782 204 aaKnown RBP11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 P2RY4P51582 365 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 KEAP1Q14145 624 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 OR1Q1Q15612 314 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 VMACQ2NL98 169 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 BEX5Q5H9J7 111 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 ALG10BQ5I7T1 473 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 FAM91A1Q658Y4 838 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 TMEM225Q6GV28 225 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 ULK3Q6PHR2 472 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 PATL1Q86TB9 770 aaKnown RBP11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 CALHM3Q86XJ0 350 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 P3H2Q8IVL5 708 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 SLC30A8Q8IWU4 369 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 ZNF433Q8N7K0 673 aaPredicted RBP11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 GPR32P1Q8NGA4 272 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 OR9K2Q8NGE7 335 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 OR8J3Q8NGG0 315 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 MFSD8Q8NHS3 518 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 HSD17B8Q92506 261 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 SLC38A4Q969I6 547 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 TAAR8Q969N4 342 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 TAMM41Q96BW9 452 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 SLC25A36Q96CQ1 311 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 MBD6Q96DN6 1003 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 KTI12Q96EK9 354 aaPredicted RBP11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 PLPPR2Q96GM1 343 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 ECSITQ9BQ95 431 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 PTDSS2Q9BVG9 487 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 SF3B5Q9BWJ5 86 aaKnown RBP11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 CXXC4Q9H2H0 198 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 TMEM27Q9HBJ8 222 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 PARPBPQ9NWS1 579 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 TESQ9UGI8 421 aaKnown RBP11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 USP22Q9UPT9 525 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 SLC9A8Q9Y2E8 581 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 CAPN7Q9Y6W3 813 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 DSCAMO60469 2012 aa11.25□□□□□ -0.61
PRPF40A-203ENST00000448428 IGKV1D-42A0A075B6H8 117 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 A0A087WUJ7 227 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 A0A0B4J2E0 115 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 A0A1B0GX12 115 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 M0R3H8 397 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 SLC22A2O15244 555 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 PLAUP00749 431 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 CD53P19397 219 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 CD247P20963 164 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 CRYBA2P53672 197 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 SEC24CP53992 1094 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 CDH12P55289 794 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 FOXG1P55316 489 aaPredicted RBP11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 NCALDP61601 193 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 FAPQ12884 760 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 NRF1Q16656 503 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 INTS11Q5TA45 600 aaKnown RBP11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 CASP12Q6UXS9 341 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 CCDC80Q76M96 950 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 GPAT4Q86UL3 456 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 POU5F2Q8N7G0 328 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 PCYOX1LQ8NBM8 494 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 OR4D11Q8NGI4 311 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 TMEM45BQ96B21 275 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 SLC47A1Q96FL8 570 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 ZNF583Q96ND8 569 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 ZNF385AQ96PM9 386 aaKnown RBP11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 MCHR1Q99705 422 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 ARHGDIGQ99819 225 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 USB1Q9BQ65 265 aaKnown RBP11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 EVA1AQ9H8M9 152 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 UBTD1Q9HAC8 227 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 SLC7A10Q9NS82 523 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 GID8Q9NWU2 228 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 ASB6Q9NWX5 421 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 CCDC168Q8NDH2 2452 aa11.24□□□□□ -0.61
PRPF40A-203ENST00000448428 MED13LQ71F56 2210 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 CCDC22O60826 627 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 VAMP5O95183 116 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 GGT1P19440 569 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 NR1H2P55055 460 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 NPTX1Q15818 432 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 STK11Q15831 433 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 ACKR1Q16570 336 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 DEFB113Q30KQ7 82 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 TSPO2Q5TGU0 170 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 SEZ6L2Q6UXD5 910 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 CREB3L2Q70SY1 520 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 AAED1Q7RTV5 226 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 RANBP3LQ86VV4 465 aaPredicted RBP11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 RBM45Q8IUH3 476 aaKnown RBP11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 KDM8Q8N371 416 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms