RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 CSNK1G1Q9HCP0 422 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 B3GAT2Q9NPZ5 323 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 NANSQ9NR45 359 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 PAK1IP1Q9NWT1 392 aaPredicted RBP4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 THAP10Q9P2Z0 257 aaPredicted RBP4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 WARS2Q9UGM6 360 aaKnown RBP4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 KCNIP3Q9Y2W7 256 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 PYGO1Q9Y3Y4 419 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 TRGV8A0A0C4DH27 118 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 MEX3AA1L020 520 aaKnown RBP4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 FAM172BPA6NC97 362 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 OR5B21A6NL26 309 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 HCN1O60741 890 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 FCN3O75636 299 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 UBTFL1P0CB47 393 aaPredicted RBP4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 RNH1P13489 461 aaKnown RBP4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 DPEP1P16444 411 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 PRKACGP22612 351 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 ELK3P41970 407 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 CDKN2AP42771 156 aaKnown RBP4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 MAGEA9P43362 315 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 RGRP47804 291 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 CX3CR1P49238 355 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 TMED10P49755 219 aaKnown RBP4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 PKNOX1P55347 436 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 SRPXP78539 464 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 MRPS22P82650 360 aaKnown RBP4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 FKBP3Q00688 224 aaKnown RBP4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 OR5I1Q13606 314 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 OXA1LQ15070 435 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 AANATQ16613 207 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 C17orf58Q2M2W7 97 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 KLHL22Q53GT1 634 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 ADAMTSL4-AS1Q5T5F5 129 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 GPRC6AQ5T6X5 926 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 OR52E8Q6IFG1 317 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 ERICH5Q6P6B1 374 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 TTC23LQ6PF05 361 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 ZFAND4Q86XD8 727 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 CCDC65Q8IXS2 484 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 ZNF248Q8NDW4 579 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 LRRC20Q8TCA0 184 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 TAF15Q92804 592 aaKnown RBP eCLIP4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 MYDGFQ969H8 173 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 ATXN7L3BQ96GX2 97 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 ZNF778Q96MU6 729 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 TSSK3Q96PN8 268 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 KCNS3Q9BQ31 491 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 LLPHQ9BRT6 129 aaKnown RBP4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 HCAR1Q9BXC0 346 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 TM6SF2Q9BZW4 377 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 MMP28Q9H239 520 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 OR52A5Q9H2C5 316 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 NTN4Q9HB63 628 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 PNO1Q9NRX1 252 aaKnown RBP4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 ADA2Q9NZK5 511 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 PCDHGB1Q9Y5G3 927 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 CACNA1IQ9P0X4 2223 aa4.27□□□□□ -1.73
TM9SF3-202ENST00000443638 IGHV4-30-2A0A087WSY4 118 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 A0A1B0GWB2 263 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 LRRIQ3A6PVS8 624 aaPredicted RBP4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 ZNF705EA8MWA4 302 aaPredicted RBP4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 B4DXG7 233 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 E7ESA3 106 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 K7ENP7 123 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 SNAP91O60641 907 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 SCRG1O75711 98 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 ZFAND5O76080 213 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 OXSR1O95747 527 aaPredicted RBP4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 GNB3P16520 340 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 BCL3P20749 454 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 IL12AP29459 219 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 ACVR1BP36896 505 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 SLC1A1P43005 524 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 NPBWR2P48146 333 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 ALDH3B2P48448 385 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 KCNJ3P48549 501 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 ARHGDIAP52565 204 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 EFNA3P52797 238 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 IST1P53990 364 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 ATP5J2P56134 94 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 GSTO1P78417 241 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 GPR176Q14439 515 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 ZNF146Q15072 292 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 C14orf28Q4W4Y0 310 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 PWWP2BQ6NUJ5 590 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 RFWD3Q6PCD5 774 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 ULK3Q6PHR2 472 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 ZNF836Q6ZNA1 936 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 SLC26A9Q7LBE3 791 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 APOBEC3FQ8IUX4 373 aaKnown RBP4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 TMEM104Q8NE00 496 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 FBXO36Q8NEA4 188 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 NUP37Q8NFH4 326 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 OR56A4Q8NGH8 313 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 OR1S2Q8NGQ3 325 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 OR2T6Q8NHC8 308 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 ZNF519Q8TB69 540 aa4.26□□□□□ -1.73
TM9SF3-202ENST00000443638 TCTEX1D2Q8WW35 142 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms