RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 C5orf58C9J3I9 102 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 E7EQL1 145 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 ZNF587BE7ETH6 402 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 UBDO15205 165 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 CD5LO43866 347 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 ERLIN1O75477 346 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 AKR7A3O95154 331 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 VAMP5O95183 116 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 IFNA2P01563 188 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 CD8AP01732 235 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 THBS1P07996 1170 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 GKN3PP0CG01 181 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 ZCCHC18P0CG32 403 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 ETFAP13804 333 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 CDH2P19022 906 aaPredicted RBP10.34□□□□□ -0.75
TTC28-203ENST00000442232 PTNP21246 168 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 MPGP29372 298 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 POLR2JP52435 117 aaKnown RBP10.34□□□□□ -0.75
TTC28-203ENST00000442232 PRPS1P60891 318 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 STX1BP61266 288 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 H3F3AP84243 136 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 TSPO2Q5TGU0 170 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 TMEM225Q6GV28 225 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 MIER2Q8N344 545 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 TMEM19Q96HH6 336 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 ADAM19Q9H013 955 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 MANSC1Q9H8J5 431 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 TPT1P8Q9HAU6 139 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 SLC7A10Q9NS82 523 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 RLIMQ9NVW2 624 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 ADPRHL2Q9NX46 363 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 RPS6KB2Q9UBS0 482 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 PMF1-BGLAPU3KQ54 211 aa10.34□□□□□ -0.75
TTC28-203ENST00000442232 SONP18583 2426 aaKnown RBP10.34□□□□□ -0.75
TTC28-203ENST00000442232 DSPPQ9NZW4 1301 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 A0A0G2JPF8 293 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 HNRNPCL2B2RXH8 293 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 HNRNPCL3B7ZW38 293 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 FRS3O43559 492 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 HNRNPCL1O60812 293 aaKnown RBP10.33□□□□□ -0.76
TTC28-203ENST00000442232 NDUFS7O75251 213 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 AHSA1O95433 338 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 C1QCP02747 245 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 CSF3P09919 207 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 HNRNPCL4P0DMR1 293 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 WDR4P57081 412 aaKnown RBP10.33□□□□□ -0.76
TTC28-203ENST00000442232 UBE2NP61088 152 aaKnown RBP10.33□□□□□ -0.76
TTC28-203ENST00000442232 MAGOHP61326 146 aaKnown RBP10.33□□□□□ -0.76
TTC28-203ENST00000442232 ZNF311Q5JNZ3 666 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 RPS26P11Q5JNZ5 115 aaPredicted RBP10.33□□□□□ -0.76
TTC28-203ENST00000442232 C1orf140Q5VVS0 124 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 PRAMEF8Q5VWM4 474 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 PRAMEF7Q5VXH5 474 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 C11orf71Q6IPW1 123 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 TMEM99Q8N816 258 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 SPATA9Q9BWV2 254 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 AMBRA1Q9C0C7 1298 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 MOV10Q9HCE1 1003 aaKnown RBP10.33□□□□□ -0.76
TTC28-203ENST00000442232 OBP2BQ9NPH6 170 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 TMEM45AQ9NWC5 275 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 RASD1Q9Y272 281 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 FKBP7Q9Y680 259 aa10.33□□□□□ -0.76
TTC28-203ENST00000442232 ELOA3DA6NLF2 546 aaPredicted RBP10.32□□□□□ -0.76
TTC28-203ENST00000442232 H7C417 338 aa10.32□□□□□ -0.76
TTC28-203ENST00000442232 PDLIM1O00151 329 aa10.32□□□□□ -0.76
TTC28-203ENST00000442232 ZNF500O60304 480 aaPredicted RBP10.32□□□□□ -0.76
TTC28-203ENST00000442232 TFPTP0C1Z6 253 aa10.32□□□□□ -0.76
TTC28-203ENST00000442232 SLC25A16P16260 332 aa10.32□□□□□ -0.76
TTC28-203ENST00000442232 PAX7P23759 505 aa10.32□□□□□ -0.76
TTC28-203ENST00000442232 APOBEC3AP31941 199 aaPredicted RBP10.32□□□□□ -0.76
TTC28-203ENST00000442232 NTF4P34130 210 aa10.32□□□□□ -0.76
TTC28-203ENST00000442232 SLC18A1P54219 525 aa10.32□□□□□ -0.76
TTC28-203ENST00000442232 FOXG1P55316 489 aaPredicted RBP10.32□□□□□ -0.76
TTC28-203ENST00000442232 IRX1P78414 480 aaPredicted RBP10.32□□□□□ -0.76
TTC28-203ENST00000442232 KRTAP1-1Q07627 177 aa10.32□□□□□ -0.76
TTC28-203ENST00000442232 BNIP2Q12982 314 aa10.32□□□□□ -0.76
TTC28-203ENST00000442232 ELOA3BQ3SY89 546 aa10.32□□□□□ -0.76
TTC28-203ENST00000442232 SLC9B1Q4ZJI4 515 aa10.32□□□□□ -0.76
TTC28-203ENST00000442232 GOLGA6L1Q8N7Z2 621 aa10.32□□□□□ -0.76
TTC28-203ENST00000442232 ELOA3Q8NG57 546 aa10.32□□□□□ -0.76
TTC28-203ENST00000442232 BBS10Q8TAM1 723 aa10.32□□□□□ -0.76
TTC28-203ENST00000442232 STK35Q8TDR2 534 aa10.32□□□□□ -0.76
TTC28-203ENST00000442232 SLC38A5Q8WUX1 472 aa10.32□□□□□ -0.76
TTC28-203ENST00000442232 FAM168AQ92567 244 aa10.32□□□□□ -0.76
TTC28-203ENST00000442232 AURKBQ96GD4 344 aaPredicted RBP10.32□□□□□ -0.76
TTC28-203ENST00000442232 MAELQ96JY0 434 aaKnown RBP10.32□□□□□ -0.76
TTC28-203ENST00000442232 SDR39U1Q9NRG7 319 aaPredicted RBP10.32□□□□□ -0.76
TTC28-203ENST00000442232 SELENONQ9NZV5 590 aa10.32□□□□□ -0.76
TTC28-203ENST00000442232 IGHV4-30-2A0A087WSY4 118 aa10.31□□□□□ -0.76
TTC28-203ENST00000442232 A8MV72 311 aaPredicted RBP10.31□□□□□ -0.76
TTC28-203ENST00000442232 ATP6V1G2-DDX39BF2Z307 99 aa10.31□□□□□ -0.76
TTC28-203ENST00000442232 POLR3GO15318 223 aaPredicted RBP10.31□□□□□ -0.76
TTC28-203ENST00000442232 AKAP8O43823 692 aaKnown RBP10.31□□□□□ -0.76
TTC28-203ENST00000442232 ACAA2P42765 397 aaKnown RBP10.31□□□□□ -0.76
TTC28-203ENST00000442232 SH3BGRP55822 239 aaPredicted RBP10.31□□□□□ -0.76
TTC28-203ENST00000442232 NCALDP61601 193 aa10.31□□□□□ -0.76
TTC28-203ENST00000442232 SNRPD2P62316 118 aaKnown RBP10.31□□□□□ -0.76
TTC28-203ENST00000442232 IL1RL1Q01638 556 aa10.31□□□□□ -0.76
TTC28-203ENST00000442232 FADDQ13158 208 aa10.31□□□□□ -0.76
TTC28-203ENST00000442232 GTDC1Q4AE62 458 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms