RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 MAPK9P45984 424 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 DIO1P49895 249 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 INSL4Q14641 139 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 CSRP2Q16527 193 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 MST1LQ2TV78 715 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 ACTBL2Q562R1 376 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 ABLIM2Q6H8Q1 611 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 ETFRF1Q6IPR1 90 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 ADNP2Q6IQ32 1131 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 ULK3Q6PHR2 472 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 HIST2H3AQ71DI3 136 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 THNSL2Q86YJ6 484 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 MMP21Q8N119 569 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 ACBD4Q8NC06 268 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 HASPINQ8TF76 798 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 CLEC4CQ8WTT0 213 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 MR1Q95460 341 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 OTUB2Q96DC9 234 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 SMIM8Q96KF7 97 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 PANX1Q96RD7 426 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 GPR62Q9BZJ7 368 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 ACTR3CQ9C0K3 210 aaPredicted RBP8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 AUNIPQ9H7T9 357 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 SEPSECSQ9HD40 501 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 GPATCH2Q9NW75 528 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 ASF1AQ9Y294 204 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 ANKRD36A6QL64 1941 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 PRAMEF25A6NGN4 478 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 FAM157AC9JC47 383 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 PRRT4C9JH25 899 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 F5H0A9 414 aaPredicted RBP8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 F8VVB4 439 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 F8VWA3 439 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 FAM72CH0Y354 149 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 MAGEB4O15481 346 aaPredicted RBP8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 SOX15O60248 233 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 TLR5O60602 858 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 CDC14BO60729 498 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 RLN1P04808 185 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 ATP1B1P05026 303 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 MMP3P08254 477 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 CLTBP09497 229 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 VSIG10L2P0DP72 767 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 TPT1P13693 172 aaKnown RBP8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 TYMPP19971 482 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 BMI1P35226 326 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 MTNR1AP48039 350 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 STXBP1P61764 594 aaKnown RBP8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 ACVR1Q04771 509 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 EGR3Q06889 387 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 TRA2AQ13595 282 aaKnown RBP eCLIP8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 RHEBQ15382 184 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 VWA2Q5GFL6 755 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 FAM72AQ5TYM5 149 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 GDF6Q6KF10 455 aaPredicted RBP8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 FAM72DQ6L9T8 149 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 FIGNL1Q6PIW4 674 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 NDUFAF7Q7L592 441 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 SMIM15Q7Z3B0 74 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 GOLGA7Q7Z5G4 137 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 FAM72BQ86X60 149 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 DEFB106AQ8N104 65 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 PNPLA1Q8N8W4 532 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 OR7G2Q8NG99 324 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 OR52B4Q8NGK2 314 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 OR1N1Q8NGS0 311 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 OR9A4Q8NGU2 314 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 EDAQ92838 391 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 ISOC2Q96AB3 205 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 CPNE2Q96FN4 548 aaPredicted RBP8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 NPY6RQ99463 290 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 TVP23BQ9NYZ1 205 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 NUDT4Q9NZJ9 180 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 PRODH2Q9UF12 536 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 TMEM269A0A1B0GVZ9 245 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 NPEPPSL1A6NEC2 478 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 ANKRD61A6NGH8 418 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 C9J4A7 227 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 H3BN98 237 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 RNF13O43567 381 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 GPR32O75388 356 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 FAM157CP0CG43 387 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 GABRR1P24046 479 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 RAP1BP61224 184 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 TLE4Q04727 773 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 TGIF1Q15583 401 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 MAPK14Q16539 360 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 PNLIPRP3Q17RR3 467 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 AWAT1Q58HT5 328 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 C11orf87Q6NUJ2 197 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 OGFOD3Q6PK18 319 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 SMARCD3Q6STE5 483 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 ZNF621Q6ZSS3 439 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 ZNF467Q7Z7K2 595 aaPredicted RBP8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 ACOT1Q86TX2 421 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 RGL4Q8IZJ4 473 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 BEST3Q8N1M1 668 aa8.19□□□□□ -1.1
CDC42BPA-206ENST00000429440 RNASEH2CQ8TDP1 164 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms