RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 ANKRD61A6NGH8 418 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 ZNF705EA8MWA4 302 aaPredicted RBP13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 J3QRE1 110 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 IL5P05113 134 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 MGMTP16455 207 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 PSMB10P40306 273 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 PTH2RP49190 550 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 NRG3P56975 720 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 ARL14Q8N4G2 192 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 TMIEQ8NEW7 156 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 OR52L1Q8NGH7 329 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 OR8S1Q8NH09 359 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 INTS12Q96CB8 462 aaKnown RBP13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 OTUB2Q96DC9 234 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 SLC25A38Q96DW6 304 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 PIGMQ9H3S5 423 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 ZNF275Q9NSD4 429 aaPredicted RBP13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 H3BSH0 61 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 SCAMP1O15126 338 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 SOCS5O75159 536 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 PCDH8O95206 1070 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 BMP7P18075 431 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 FPR3P25089 353 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 PTAFRP25105 342 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 TAF13Q15543 124 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 ZNF805Q5CZA5 627 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 FAM199XQ6PEV8 388 aaPredicted RBP13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 TMED4Q7Z7H5 227 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 BEST3Q8N1M1 668 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 DCAF4L2Q8NA75 395 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 ZSCAN1Q8NBB4 408 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 CYB5D2Q8WUJ1 264 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 TEAD3Q99594 435 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 MCHR1Q99705 422 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 CHST6Q9GZX3 395 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 NOX4Q9NPH5 578 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 ZFP57Q9NU63 452 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 MED17Q9NVC6 651 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 ZNF629Q9UEG4 869 aaPredicted RBP13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 MKL2Q9ULH7 1088 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 ZNF106Q9H2Y7 1883 aaKnown RBP13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 TRBV2A0A0J9YWF9 115 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 TMEM272A0A1B0GTI8 110 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 OR6C76A6NM76 312 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 PSMD9O00233 223 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 NPC1O15118 1278 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 POP7O75817 140 aaKnown RBP13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 HMGN2P05204 90 aaKnown RBP13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 RPA2P15927 270 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 CDK2P24941 298 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 NCBP2P52298 156 aaKnown RBP eCLIP13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 TAS2R43P59537 309 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 SRSF3P84103 164 aaKnown RBP13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 TSC22D1Q15714 1073 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 CSRP2Q16527 193 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 ZNF750Q32MQ0 723 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 TMEM240Q5SV17 173 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 HENMT1Q5T8I9 393 aaKnown RBP13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 YOD1Q5VVQ6 348 aaPredicted RBP13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 NXPE4Q6UWF7 544 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 UNQ6126/PRO20091Q6UXV3 157 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 MOB3CQ70IA8 216 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 OR2AP1Q8NGE2 309 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 DOK4Q8TEW6 326 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 PAQR8Q8TEZ7 354 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 ACOT11Q8WXI4 607 aaPredicted RBP13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 VOPP1Q96AW1 172 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 CAMK1GQ96NX5 476 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 TRMT61BQ9BVS5 477 aaKnown RBP13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 SUV39H2Q9H5I1 410 aa13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 ACSS1Q9NUB1 689 aaPredicted RBP13.56□□□□□ -0.24
NCKIPSD-204ENST00000416649 FADS1O60427 444 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 RHOP08100 348 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 C8orf89P0DMQ9 161 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 NAA10P41227 235 aaPredicted RBP13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 CENPAP49450 140 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 ANXA11P50995 505 aaKnown RBP13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 PPIAP62937 165 aaKnown RBP13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 ZNF85Q03923 595 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 RBM39Q14498 530 aaKnown RBP13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 STPG1Q5TH74 334 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 ASTLQ6HA08 431 aaPredicted RBP13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 SUN3Q8TAQ9 357 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 DIO2Q92813 273 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 RIOK2Q9BVS4 552 aaKnown RBP13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 EXO5Q9H790 373 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 AHSPQ9NZD4 102 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 SLC7A7Q9UM01 511 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 OR51B4Q9Y5P0 310 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 MEX3AA1L020 520 aaKnown RBP13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 SYT5O00445 386 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 SBK2P0C263 348 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 ZGLP1P0C6A0 271 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 TMIGD3P0DMS9 266 aaPredicted RBP13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 NT5EP21589 574 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 EDNRAP25101 427 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 TEAD1P28347 426 aa13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 NR0B1P51843 470 aaKnown RBP13.55□□□□□ -0.24
NCKIPSD-204ENST00000416649 PNLIPRP1P54315 467 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms