RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 GLCCI1Q86VQ1 547 aa11.3□□□□□ -0.6
UBA3-203ENST00000415609 DTX3Q8N9I9 347 aa11.3□□□□□ -0.6
UBA3-203ENST00000415609 SCAIQ8N9R8 606 aa11.3□□□□□ -0.6
UBA3-203ENST00000415609 OR4M1Q8NGD0 313 aa11.3□□□□□ -0.6
UBA3-203ENST00000415609 TRMT10AQ8TBZ6 339 aaKnown RBP11.3□□□□□ -0.6
UBA3-203ENST00000415609 CAPSLQ8WWF8 208 aa11.3□□□□□ -0.6
UBA3-203ENST00000415609 THAP4Q8WY91 577 aa11.3□□□□□ -0.6
UBA3-203ENST00000415609 SMIM19Q96E16 107 aa11.3□□□□□ -0.6
UBA3-203ENST00000415609 ZNF486Q96H40 463 aaPredicted RBP11.3□□□□□ -0.6
UBA3-203ENST00000415609 TTYH2Q9BSA4 534 aa11.3□□□□□ -0.6
UBA3-203ENST00000415609 RAB33BQ9H082 229 aa11.3□□□□□ -0.6
UBA3-203ENST00000415609 TTYH1Q9H313 450 aaPredicted RBP11.3□□□□□ -0.6
UBA3-203ENST00000415609 RBFOX1Q9NWB1 397 aaKnown RBP11.3□□□□□ -0.6
UBA3-203ENST00000415609 A0A0G2JK05 382 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 FAM240BA0A1B0GVZ2 78 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 A0A1W2PPK0 400 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 FRG2CA6NGY1 282 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 GMFGO60234 142 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 RAB3BP20337 219 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 EDNRAP25101 427 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 GRPRP30550 384 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 DDOSTP39656 456 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 ADH7P40394 386 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 CSNK1EP49674 416 aaKnown RBP11.29□□□□□ -0.6
UBA3-203ENST00000415609 SIRPAP78324 504 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 HSD11B2P80365 405 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 SF3A2Q15428 464 aaKnown RBP11.29□□□□□ -0.6
UBA3-203ENST00000415609 CCDC85BQ15834 202 aaPredicted RBP11.29□□□□□ -0.6
UBA3-203ENST00000415609 ZNF74Q16587 644 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 SLC25A35Q3KQZ1 300 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 ZFP69Q49AA0 526 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 SLC35D3Q5M8T2 416 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 PRAMEF17Q5VTA0 474 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 OGFOD3Q6PK18 319 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 APOOLQ6UXV4 268 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 JAZF1Q86VZ6 243 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 Q8N9G6 341 aaPredicted RBP11.29□□□□□ -0.6
UBA3-203ENST00000415609 ZNF563Q8TA94 476 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 MRPL48Q96GC5 212 aaKnown RBP11.29□□□□□ -0.6
UBA3-203ENST00000415609 ST6GAL2Q96JF0 529 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 LCORQ96JN0 433 aaPredicted RBP11.29□□□□□ -0.6
UBA3-203ENST00000415609 Q96M85 177 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 DMRTB1Q96MA1 342 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 MOGAT1Q96PD6 335 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 OR1F2PQ96R84 312 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 UBL7Q96S82 380 aaPredicted RBP11.29□□□□□ -0.6
UBA3-203ENST00000415609 CCNL2Q96S94 520 aaPredicted RBP11.29□□□□□ -0.6
UBA3-203ENST00000415609 ADOQ96SZ5 270 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 WACQ9BTA9 647 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 CCDC86Q9H6F5 360 aaKnown RBP11.29□□□□□ -0.6
UBA3-203ENST00000415609 UBE2ZQ9H832 354 aaPredicted RBP11.29□□□□□ -0.6
UBA3-203ENST00000415609 NANSQ9NR45 359 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 CYSLTR2Q9NS75 346 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 ACOXLQ9NUZ1 547 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 NCDNQ9UBB6 729 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 MRTO4Q9UKD2 239 aaKnown RBP11.29□□□□□ -0.6
UBA3-203ENST00000415609 COPS3Q9UNS2 423 aa11.29□□□□□ -0.6
UBA3-203ENST00000415609 MRPS17Q9Y2R5 130 aaKnown RBP11.29□□□□□ -0.6
UBA3-203ENST00000415609 PCDH15Q96QU1 1955 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 A0A0B4J293 547 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 TRBV2A0A0J9YWF9 115 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 A0A1B0GVC2 190 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 A0A1B0GVT2 93 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 A6NIN4 97 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 FAM171A2A8MVW0 826 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 OGG1O15527 345 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 IDH3BO43837 385 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 PAHP00439 452 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 TRAPPC2P0DI81 140 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 TRAPPC2BP0DI82 140 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 RBMS1P29558 406 aaKnown RBP11.28□□□□□ -0.6
UBA3-203ENST00000415609 PSMB10P40306 273 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 ISXQ2M1V0 245 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 LYPD4Q6UWN0 246 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 PAMR1Q6UXH9 720 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 OIT3Q8WWZ8 545 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 RNF31Q96EP0 1072 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 GPX7Q96SL4 187 aaPredicted RBP11.28□□□□□ -0.6
UBA3-203ENST00000415609 CTRCQ99895 268 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 NMNAT2Q9BZQ4 307 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 PCED1AQ9H1Q7 454 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 RPRD1BQ9NQG5 326 aaKnown RBP11.28□□□□□ -0.6
UBA3-203ENST00000415609 EXOSC3Q9NQT5 275 aaKnown RBP11.28□□□□□ -0.6
UBA3-203ENST00000415609 NLKQ9UBE8 527 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 NUFIP1Q9UHK0 495 aaKnown RBP11.28□□□□□ -0.6
UBA3-203ENST00000415609 IGHV1OR21-1A0A087WYE8 117 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 IGKV3D-11A0A0A0MRZ8 115 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 CDC14CA4D256 554 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 HTR3EA5X5Y0 456 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 C4orf47A7E2U8 309 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 H3BMH7 237 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 CPNE3O75131 537 aaKnown RBP11.28□□□□□ -0.6
UBA3-203ENST00000415609 ICOSLGO75144 302 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 ARL6IP5O75915 188 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 PIAS2O75928 621 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 DDAH2O95865 285 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 FBLP22087 321 aaKnown RBP11.28□□□□□ -0.6
UBA3-203ENST00000415609 MST1P26927 711 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 IL12BP29460 328 aa11.28□□□□□ -0.6
UBA3-203ENST00000415609 ALG10Q5BKT4 473 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms