RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ANKRD49Q8WVL7 239 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 PAGE5Q96GU1 130 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 MAGEB18Q96M61 343 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 EBF4Q9BQW3 602 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 NICN1Q9BSH3 213 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 RAB34Q9BZG1 259 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 PPA2Q9H2U2 334 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 SUDS3Q9H7L9 328 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 NHEJ1Q9H9Q4 299 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 PRR34Q9NV39 138 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 BFARQ9NZS9 450 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 ZNF639Q9UID6 485 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 KIF25Q9UIL4 384 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 TP53TG3Q9ULZ0 132 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 MMP24Q9Y5R2 645 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 V9GY05 133 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 PNPLA6Q8IY17 1366 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 IGHV1OR21-1A0A087WYE8 117 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 PCP4L1A6NKN8 68 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 OR52A4PA6NMU1 304 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 CCDC169A6NNP5 214 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 AP3B1O00203 1094 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 ZNF780AO75290 641 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 BTCP35070 178 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 DDOSTP39656 456 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 BTDP43251 543 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 GPM6AP51674 278 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 ENPEPQ07075 957 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 ZNF79Q15937 498 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 IMMTQ16891 758 aaKnown RBP2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 FILIP1LQ4L180 1135 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 PAGE3Q5JUK9 113 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 SAMD4BQ5PRF9 694 aaKnown RBP2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 FHL5Q5TD97 284 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 C1orf146Q5VVC0 180 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 C1orf94Q6P1W5 598 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 HSDL2Q6YN16 418 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 IL34Q6ZMJ4 242 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 KDM7AQ6ZMT4 941 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 ERI1Q8IV48 349 aaKnown RBP2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 RDH10Q8IZV5 341 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 UBE2J2Q8N2K1 259 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 OR2AP1Q8NGE2 309 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 OR9A1PQ8NGU1 263 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 FANK1Q8TC84 345 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 C7orf33Q8WU49 177 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 OR1E3Q8WZA6 343 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 FAM122AQ96E09 287 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 SEC22AQ96IW7 307 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 ZNF641Q96N77 438 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 ARHGDIGQ99819 225 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 POLR2J2Q9GZM3 115 aaKnown RBP2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 POLR2J3Q9H1A7 115 aaKnown RBP2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 NARFLQ9H6Q4 476 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 FOLH1BQ9HBA9 442 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 NMRAL1Q9HBL8 299 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 PISDQ9UG56 409 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 MMP17Q9ULZ9 603 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 RPL36Q9Y3U8 105 aaKnown RBP2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 ATP10AO60312 1499 aa2.75□□□□□ -1.97
HMGB1P17-201ENST00000403495 TNRQ92752 1358 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 TP53BP1Q12888 1972 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 IGLV3-22A0A075B6J6 115 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 IGHV3OR16-13A0A075B7E8 117 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 MMP23AO75900 390 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 SUPT7LO94864 414 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 CLDN9O95484 217 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 P04436 131 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 MX1P20591 662 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 FUT3P21217 361 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 CD1CP29017 333 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 GDI1P31150 447 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 VDAC2P45880 294 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 HNRNPA3P51991 378 aaKnown RBP2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 OGDHQ02218 1023 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 OR5I1Q13606 314 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 OLFML2AQ68BL7 652 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 TIGD3Q6B0B8 471 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 RFLNAQ6ZTI6 216 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 PRSS41Q7RTY9 318 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 FAM228AQ86W67 206 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 OR9G1Q8NH87 305 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 FAM151AQ8WW52 585 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 ARPC1AQ92747 370 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 TUBGCP3Q96CW5 907 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 SMIM14Q96QK8 99 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 CHRDL1Q9BU40 450 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 ETNK2Q9NVF9 386 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 AIG1Q9NVV5 245 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 RABL2AQ9UBK7 228 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 CTNNA3Q9UI47 895 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 THSD7BQ9C0I4 1608 aa2.74□□□□□ -1.97
HMGB1P17-201ENST00000403495 ZNF318Q5VUA4 2279 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 COL2A1P02458 1487 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 A0A1W2PPV9 198 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 XKRY2A2RUG3 117 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 FAM47DPA6NHR8 397 aa2.73□□□□□ -1.97
HMGB1P17-201ENST00000403495 USP27XA6NNY8 438 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms