RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 DDIT4LQ96D03 193 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZHX1-C8orf76Q96EF9 292 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 PLPPR2Q96GM1 343 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 FOXC2Q99958 501 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 WFDC6Q9BQY6 131 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 CPPED1Q9BRF8 314 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 SPATA9Q9BWV2 254 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 TMEM120AQ9BXJ8 343 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 ADAM19Q9H013 955 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 CXXC4Q9H2H0 198 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 CACYBPQ9HB71 228 aaKnown RBP5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 GP6Q9HCN6 339 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 BCL2L10Q9HD36 194 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 FGFR1OP2Q9NVK5 253 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 THUMPD1Q9NXG2 353 aaKnown RBP5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 TMEM181Q9P2C4 612 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 GPR52Q9Y2T5 361 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 NOSIPQ9Y314 301 aaKnown RBP5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 IFT52Q9Y366 437 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 HDGFL3Q9Y3E1 203 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZNF469Q96JG9 3925 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 RAI1Q7Z5J4 1906 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 VPS13CQ709C8 3753 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 IGKV3D-15A0A087WSY6 115 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 A0A1W2PR80 420 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 LIPT2A6NK58 231 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 EVPLLA8MZ36 301 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 FBP2O00757 339 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 ANGPT2O15123 496 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZNF208O43345 1280 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 DNPH1O43598 174 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 RAD51DO75771 328 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 AKR7A3O95154 331 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 GOSR1O95249 250 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 OPN1SWP03999 348 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 PPP3CBP16298 524 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 GPX2P18283 190 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 PPIBP23284 216 aaKnown RBP5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 HTR2AP28223 471 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 IDUAP35475 653 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 CLK1P49759 484 aaKnown RBP5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 MTPNP58546 118 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 SLC35A1P78382 337 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 H3F3AP84243 136 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 GUCY1A3Q02108 690 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 DMTNQ08495 405 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 FOXD4Q12950 439 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 ITGADQ13349 1161 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 NFYCQ13952 458 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 ADRM1Q16186 407 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 RUNDC3AQ59EK9 446 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 BEX5Q5H9J7 111 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 OTUD3Q5T2D3 398 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 C9orf135Q5VTT2 229 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 C1orf140Q5VVS0 124 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 PRAMEF8Q5VWM4 474 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 PRAMEF7Q5VXH5 474 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 REEP3Q6NUK4 255 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 SEZ6L2Q6UXD5 910 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 CASP12Q6UXS9 341 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZNF704Q6ZNC4 412 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 Q6ZT83 130 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 PTOV1Q86YD1 416 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 UBE2J2Q8N2K1 259 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZNF433Q8N7K0 673 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 TMEM99Q8N816 258 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 SMYD1Q8NB12 490 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 WFDC11Q8NEX6 87 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 STEAP2Q8NFT2 490 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 OR52E4Q8NGH9 312 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 PIGXQ8TBF5 258 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 APH1AQ96BI3 265 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 SLC25A36Q96CQ1 311 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 MBD6Q96DN6 1003 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 MEGF10Q96KG7 1140 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 ALPK1Q96QP1 1244 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 CGREF1Q99674 301 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 TACO1Q9BSH4 297 aaKnown RBP5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 RABEP2Q9H5N1 569 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 PIF1Q9H611 641 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 SRA1Q9HD15 236 aaKnown RBP5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 FANCFQ9NPI8 374 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 ADPRHL2Q9NX46 363 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 EMC3Q9P0I2 261 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 SEC14L4Q9UDX3 406 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 LEF1Q9UJU2 399 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 TRIM33Q9UPN9 1127 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 TRAPPC4Q9Y296 219 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 NDUFAF1Q9Y375 327 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 FLVCR1Q9Y5Y0 555 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 JMJD1CQ15652 2540 aa5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 SONP18583 2426 aaKnown RBP5.09□□□□□ -1.59
HMGB1P20-201ENST00000402555 HEATR1Q9H583 2144 aaKnown RBP5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 IGKV1D-42A0A075B6H8 117 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 A0A1B0GWA3 101 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 AQP7P3A6NL99 342 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 CCT8L1PA6NM43 557 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 A8MVM7 634 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 J3QW42 95 aa5.08□□□□□ -1.6
HMGB1P20-201ENST00000402555 M0R3H8 397 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms