RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 ZNF840PA6NDX5 716 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 WIPF3A6NGB9 483 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 NBR2O15453 112 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 KDELR3O43731 214 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 IGSF6O95976 241 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 RBMY1CP0DJD4 496 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 ZNF7P17097 686 aaPredicted RBP3.18□□□□□ -1.9
XRN1-202ENST00000392981 GRPRP30550 384 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 SSTR2P30874 369 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 DUTP33316 252 aaKnown RBP3.18□□□□□ -1.9
XRN1-202ENST00000392981 CEACAM3P40198 252 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 SNAP25P60880 206 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 POLR2GP62487 172 aaKnown RBP eCLIP3.18□□□□□ -1.9
XRN1-202ENST00000392981 S100A12P80511 92 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 TRAM2Q15035 370 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 VAMP3Q15836 100 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 PRTGQ2VWP7 1150 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 ZNF699Q32M78 642 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 ACCSLQ4AC99 568 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 CD163Q86VB7 1156 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 NKAIN4Q8IVV8 208 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 C1orf210Q8IVY1 113 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 C17orf78Q8N4C9 275 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 NECAP1Q8NC96 275 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 DTD1Q8TEA8 209 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 C9orf72Q96LT7 481 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 PAPOLGQ9BWT3 736 aaKnown RBP3.18□□□□□ -1.9
XRN1-202ENST00000392981 POFUT2Q9Y2G5 429 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 UTP11Q9Y3A2 253 aaKnown RBP3.18□□□□□ -1.9
XRN1-202ENST00000392981 GMPPBQ9Y5P6 360 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 WIF1Q9Y5W5 379 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 ABCC11Q96J66 1382 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 USP47Q96K76 1375 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 RELNP78509 3460 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 SYNMO15061 1565 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 PPLO60437 1756 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 KDM5DQ9BY66 1539 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 CCDC182A6NF36 153 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 C2CD4BA6NLJ0 364 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 F5H6K3 240 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 PDHXO00330 501 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 SOX15O60248 233 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 MAGEC1O60732 1142 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 FGF19O95750 216 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 FABP1P07148 127 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 UGT2B7P16662 529 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 SERPINB1P30740 379 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 BTN3A2P78410 334 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 TRIP13Q15645 432 aaPredicted RBP3.18□□□□□ -1.9
XRN1-202ENST00000392981 TMEM179Q6ZVK1 233 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 SSX7Q7RTT5 188 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 ATPAF2Q8N5M1 289 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 LINC01356Q8N9X3 169 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 CATSPER1Q8NEC5 780 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 OR4D10Q8NGI6 311 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 TFGQ92734 400 aaPredicted RBP3.18□□□□□ -1.9
XRN1-202ENST00000392981 SERPINB12Q96P63 405 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 TNFRSF13CQ96RJ3 184 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 FAIM2Q9BWQ8 316 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 SLC25A51Q9H1U9 297 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 VIPAS39Q9H9C1 493 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 ADAM22Q9P0K1 906 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 MRM2Q9UI43 246 aaKnown RBP3.18□□□□□ -1.9
XRN1-202ENST00000392981 SAMD4AQ9UPU9 718 aaKnown RBP3.18□□□□□ -1.9
XRN1-202ENST00000392981 TRBV11-1A0A0K0K1C0 115 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 VSTM2BA6NLU5 285 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 OR5K4A6NMS3 321 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 E7ESA3 106 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 H7C0C1 242 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 SHOX2O60902 331 aaPredicted RBP3.18□□□□□ -1.9
XRN1-202ENST00000392981 WDR1O75083 606 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 JTBO76095 146 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 BCKDHAP12694 445 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 M6PRP20645 277 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 CYP3A5P20815 502 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 CD79BP40259 229 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 ATP6V1FQ16864 119 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 EOGTQ5NDL2 527 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 SLC35D2Q76EJ3 337 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 OR5R1Q8NH85 324 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 TCTEX1D2Q8WW35 142 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 SORCS1Q8WY21 1168 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 ZNF354BQ96LW1 612 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 FUCA2Q9BTY2 467 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 EGLN3Q9H6Z9 239 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 CLN6Q9NWW5 311 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 MMP17Q9ULZ9 603 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 SCML1Q9UN30 329 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 NCOA2Q15596 1464 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 WDR7Q9Y4E6 1490 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 C9orf118A6NHY6 69 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 ERVV-2B6SEH9 535 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 H0Y980 276 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 H3BQF6 201 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 hCG_2039718K7EN88 272 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 PSMD12O00232 456 aaPredicted RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 CRYZL1O95825 349 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 H2AFB2P0C5Z0 115 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 PCSK6P29122 969 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 RPL27P61353 136 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms