RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 PPP4R4Q6NUP7 873 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 ZNF730Q6ZMV8 503 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 NCCRP1Q6ZVX7 275 aaPredicted RBP11.33□□□□□ -0.6
SMN1-202ENST00000380707 MBOAT2Q6ZWT7 520 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 FJX1Q86VR8 437 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 NRMQ8IXM6 262 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 MFSD8Q8NHS3 518 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 ROBO4Q8WZ75 1007 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 CPNE4Q96A23 557 aaPredicted RBP11.33□□□□□ -0.6
SMN1-202ENST00000380707 EPYCQ99645 322 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 VKORC1Q9BQB6 163 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 TTYH2Q9BSA4 534 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 YY1AP1Q9H869 796 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 MCTS1Q9ULC4 181 aaKnown RBP11.33□□□□□ -0.6
SMN1-202ENST00000380707 MEMO1Q9Y316 297 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 MED31Q9Y3C7 131 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 ZNF175Q9Y473 711 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 LYVE1Q9Y5Y7 322 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 USP9XQ93008 2570 aaPredicted RBP11.33□□□□□ -0.6
SMN1-202ENST00000380707 UTP20O75691 2785 aaKnown RBP11.32□□□□□ -0.6
SMN1-202ENST00000380707 SH3PXD2BA1X283 911 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 TNFRSF11BO00300 401 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 CCL21O00585 134 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 SMAD9O15198 467 aaKnown RBP11.32□□□□□ -0.6
SMN1-202ENST00000380707 OR2T1O43869 369 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 TOXO94900 526 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 SYNGR4O95473 234 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 CH25HO95992 272 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 CBLP22681 906 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 AGFG1P52594 562 aaKnown RBP11.32□□□□□ -0.6
SMN1-202ENST00000380707 PMPCAQ10713 525 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 ZNF74Q16587 644 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 EXOC3L2Q2M3D2 409 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 MEX3DQ86XN8 651 aaKnown RBP11.32□□□□□ -0.6
SMN1-202ENST00000380707 CCDC103Q8IW40 242 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 RNF113BQ8IZP6 322 aaKnown RBP11.32□□□□□ -0.6
SMN1-202ENST00000380707 C10orf53Q8N6V4 93 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 LRRC17Q8N6Y2 441 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 C9orf106Q8NAJ2 232 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 OR4C15Q8NGM1 316 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 WNT2BQ93097 391 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 ALPK1Q96QP1 1244 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 DMRTA2Q96SC8 542 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 TAPBPLQ9BX59 468 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 KLHL4Q9C0H6 718 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 SEC14L4Q9UDX3 406 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 U3KQV3 271 aa11.32□□□□□ -0.6
SMN1-202ENST00000380707 MBD3L4A6NDZ8 208 aaPredicted RBP11.31□□□□□ -0.6
SMN1-202ENST00000380707 MBD3L3A6NE82 208 aaPredicted RBP11.31□□□□□ -0.6
SMN1-202ENST00000380707 MBD3L5A6NJ08 208 aaPredicted RBP11.31□□□□□ -0.6
SMN1-202ENST00000380707 ENO4A6NNW6 628 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 H3BNX3 289 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 CLOCKO15516 846 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 DNPH1O43598 174 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 RRP9O43818 475 aaKnown RBP11.31□□□□□ -0.6
SMN1-202ENST00000380707 EIF1BO60739 113 aaKnown RBP11.31□□□□□ -0.6
SMN1-202ENST00000380707 RAMP1O60894 148 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 FZD7O75084 574 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 AKR7A3O95154 331 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 IGF2P01344 180 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 GRPRP30550 384 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 IST1P53990 364 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 PRKCDQ05655 676 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 ZNF771Q7L3S4 317 aaPredicted RBP11.31□□□□□ -0.6
SMN1-202ENST00000380707 FCRLAQ7L513 359 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 SLC46A3Q7Z3Q1 461 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 TMEM99Q8N816 258 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 OR4K5Q8NGD3 323 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 OR6S1Q8NH40 331 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 MBD3L2Q8NHZ7 208 aaPredicted RBP11.31□□□□□ -0.6
SMN1-202ENST00000380707 BPIFA2Q96DR5 249 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 PRRG4Q9BZD6 226 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 REEP1Q9H902 201 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 RNF122Q9H9V4 155 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 NTN4Q9HB63 628 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 DNAJB9Q9UBS3 223 aa11.31□□□□□ -0.6
SMN1-202ENST00000380707 SAMHD1Q9Y3Z3 626 aaKnown RBP11.31□□□□□ -0.6
SMN1-202ENST00000380707 A0A1B0GUH1 482 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 M0R082 166 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 GNGT2O14610 69 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 HNRNPRO43390 633 aaKnown RBP11.3□□□□□ -0.6
SMN1-202ENST00000380707 IFI30P13284 250 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 FUT1P19526 365 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 MAKP20794 623 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 TIMP3P35625 211 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 P2RY4P51582 365 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 CTBP2P56545 445 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 NUP107P57740 925 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 LAPTM4AQ15012 233 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 C4orf17Q53FE4 359 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 PAQR6Q6TCH4 344 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 RRM2BQ7LG56 351 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 P4HA3Q7Z4N8 544 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 TMEM179BQ7Z7N9 219 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 NAXEQ8NCW5 288 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 ZNF417Q8TAU3 575 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 RNF128Q8TEB7 428 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 ABHD3Q8WU67 409 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 LRTOMTQ8WZ04 291 aa11.3□□□□□ -0.6
SMN1-202ENST00000380707 ZHX1-C8orf76Q96EF9 292 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms