RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 BPIFA4PQ86YQ2 179 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 TMEM151BQ8IW70 566 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 OR5L1Q8NGL2 311 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 TMEM239Q8WW34 195 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 HCAR1Q9BXC0 346 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 PRO1933Q9H354 126 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 IL17BQ9UHF5 180 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 LIPGQ9Y5X9 500 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 ERVK-7P63135 1459 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 PPLO60437 1756 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 FOXO6A8MYZ6 492 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 GABRPO00591 440 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 ERI3O43414 337 aaKnown RBP8.2□□□□□ -1.1
LIG3-202ENST00000378526 GLB1P16278 677 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 BTF3P20290 206 aaKnown RBP8.2□□□□□ -1.1
LIG3-202ENST00000378526 IVDP26440 423 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 HERVK_113P61574 105 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 ZNF678Q5SXM1 525 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 SUSD4Q5VX71 490 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 ZDHHC24Q6UX98 284 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 TMIGD1Q6UXZ0 262 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 HSD17B13Q7Z5P4 300 aaPredicted RBP8.2□□□□□ -1.1
LIG3-202ENST00000378526 Q8N9G6 341 aaPredicted RBP8.2□□□□□ -1.1
LIG3-202ENST00000378526 OR4K14Q8NGD5 310 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 CREB3L4Q8TEY5 395 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 TMEM191AQ9H0A3 160 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 DTLQ9NZJ0 730 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 HEATR5BQ9P2D3 2071 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 NEO1Q92859 1461 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 CRYM-AS1A6NIL9 109 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 DUSP11O75319 330 aaKnown RBP8.19□□□□□ -1.1
LIG3-202ENST00000378526 BMP5P22003 454 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 SLC22A6Q4U2R8 563 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 DDIT4LQ96D03 193 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 ABHD6Q9BV23 337 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 RIC1Q4ADV7 1423 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 SNRPGP15A8MWD9 76 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 SIAH2O43255 324 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 RHBDL1O75783 438 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 APBA3O96018 575 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 CRYABP02511 175 aaKnown RBP8.19□□□□□ -1.1
LIG3-202ENST00000378526 TPOP07202 933 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 ADORA3P0DMS8 318 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 PCGF2P35227 344 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 NOVA1P51513 510 aaKnown RBP8.19□□□□□ -1.1
LIG3-202ENST00000378526 FAM209BQ5JX69 171 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 LANCL3Q6ZV70 420 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 PIWIL3Q7Z3Z3 882 aaKnown RBP8.19□□□□□ -1.1
LIG3-202ENST00000378526 PRSS58Q8IYP2 241 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 OR10Q1Q8NGQ4 319 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 OR2AE1Q8NHA4 323 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 SLC35B2Q8TB61 432 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 SEC11CQ9BY50 192 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 HOXD1Q9GZZ0 328 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 RAB6CQ9H0N0 254 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 RHBDD3Q9Y3P4 386 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 MAP3K4Q9Y6R4 1608 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 LOC102725191A0A1B0GVB3 256 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 C11orf98E9PRG8 122 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 NME2P1O60361 137 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 ALDOCP09972 364 aaKnown RBP8.19□□□□□ -1.1
LIG3-202ENST00000378526 HMGCLP35914 325 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 OR3A1P47881 315 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 ZNF528Q3MIS6 628 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 DMBX1Q8NFW5 382 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 TMIGD2Q96BF3 282 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 USB1Q9BQ65 265 aaKnown RBP8.19□□□□□ -1.1
LIG3-202ENST00000378526 TLR9Q9NR96 1032 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 NSG2Q9Y328 171 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 UBIAD1Q9Y5Z9 338 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 SCN1AP35498 2009 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 VSTM2BA6NLU5 285 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 TYROBPO43914 113 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 EOMESO95936 686 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 CSTAP01040 98 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 OPN1MWP04001 364 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 IGKV5-2P06315 115 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 OPN1MW2P0DN77 364 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 OPN1MW3P0DN78 364 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 ARP10275 920 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 IRS1P35568 1242 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 MTNR1BP49286 362 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 ATP5IP56385 69 aaPredicted RBP8.19□□□□□ -1.1
LIG3-202ENST00000378526 EXOSC2Q13868 293 aaKnown RBP8.19□□□□□ -1.1
LIG3-202ENST00000378526 FAM98CQ17RN3 349 aaKnown RBP8.19□□□□□ -1.1
LIG3-202ENST00000378526 GLYATL3Q5SZD4 288 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 PDZD3Q86UT5 571 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 SP8Q8IXZ3 490 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 CMTM4Q8IZR5 234 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 C2orf73Q8N5S3 287 aaPredicted RBP8.19□□□□□ -1.1
LIG3-202ENST00000378526 OR2A1Q8NGT9 310 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 TEAD3Q99594 435 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 OR5V1Q9UGF6 321 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 PIRO00625 290 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 TGFB1I1O43294 461 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 NUDT3O95989 172 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 SFTA3P0C7M3 94 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 PDGFRLQ15198 375 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 ANKRD16Q6P6B7 361 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 PAQR3Q6TCH7 311 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms