RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 GLSO94925 669 aaPredicted RBP13.34□□□□□ -0.27
TRAF1-201ENST00000373887 DMWDQ09019 674 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 METAP1DQ6UB28 335 aaPredicted RBP13.34□□□□□ -0.27
TRAF1-201ENST00000373887 RELL1Q8IUW5 271 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 RBM12BQ8IXT5 1001 aaKnown RBP13.34□□□□□ -0.27
TRAF1-201ENST00000373887 SPARTQ8N0X7 666 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 SLC16A7O60669 478 aa13.33□□□□□ -0.27
TRAF1-201ENST00000373887 DPM1O60762 260 aa13.33□□□□□ -0.27
TRAF1-201ENST00000373887 PRAF2O60831 178 aa13.33□□□□□ -0.27
TRAF1-201ENST00000373887 PPT1P50897 306 aa13.33□□□□□ -0.27
TRAF1-201ENST00000373887 GSCP56915 257 aaPredicted RBP13.33□□□□□ -0.27
TRAF1-201ENST00000373887 GALEQ14376 348 aa13.33□□□□□ -0.27
TRAF1-201ENST00000373887 ZNF169Q14929 603 aaPredicted RBP13.33□□□□□ -0.27
TRAF1-201ENST00000373887 TMEM41BQ5BJD5 291 aa13.33□□□□□ -0.27
TRAF1-201ENST00000373887 NDUFAF7Q7L592 441 aa13.33□□□□□ -0.27
TRAF1-201ENST00000373887 ZNF546Q86UE3 836 aa13.33□□□□□ -0.27
TRAF1-201ENST00000373887 C19orf47Q8N9M1 422 aaKnown RBP13.33□□□□□ -0.27
TRAF1-201ENST00000373887 PSMF1Q92530 271 aa13.33□□□□□ -0.27
TRAF1-201ENST00000373887 PPP6CO00743 305 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 IL32P24001 234 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 AHRP35869 848 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 PRLHRP49683 370 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 RPS27AP62979 156 aaKnown RBP13.33□□□□□ -0.28
TRAF1-201ENST00000373887 UBA52P62987 128 aaKnown RBP13.33□□□□□ -0.28
TRAF1-201ENST00000373887 EBPQ15125 230 aaKnown RBP13.33□□□□□ -0.28
TRAF1-201ENST00000373887 PGBD5Q8N414 524 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 OR4M1Q8NGD0 313 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 INTS12Q96CB8 462 aaKnown RBP13.33□□□□□ -0.28
TRAF1-201ENST00000373887 ELP4Q96EB1 424 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 GNB4Q9HAV0 340 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 CPNE5Q9HCH3 593 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 LUZP4Q9P127 313 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 ENPP5Q9UJA9 477 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 SLC6A14Q9UN76 642 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 MSTNO14793 375 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 KLKB1P03952 638 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 PLAG1Q6DJT9 500 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 FAM122CQ6P4D5 195 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 ALKAL2Q6UX46 152 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 ADGRF3Q8IZF5 1079 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 HPSE2Q8WWQ2 592 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 SLC19A3Q9BZV2 496 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 WWTR1Q9GZV5 400 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 SAP130Q9H0E3 1048 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 INIPQ9NRY2 104 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 MEIOCA2RUB1 952 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 HOXD11P31277 338 aaPredicted RBP13.33□□□□□ -0.28
TRAF1-201ENST00000373887 SLC6A8P48029 635 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 HNRNPFP52597 415 aaKnown RBP13.33□□□□□ -0.28
TRAF1-201ENST00000373887 KIAA0907Q7Z7F0 614 aaPredicted RBP13.33□□□□□ -0.28
TRAF1-201ENST00000373887 ADAM19Q9H013 955 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 C6orf106Q9H6K1 298 aaPredicted RBP13.33□□□□□ -0.28
TRAF1-201ENST00000373887 MRPL22Q9NWU5 206 aaKnown RBP13.33□□□□□ -0.28
TRAF1-201ENST00000373887 NENFQ9UMX5 172 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 G3V2L1 256 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 RRP8O43159 456 aaKnown RBP13.33□□□□□ -0.28
TRAF1-201ENST00000373887 GPR137BO60478 399 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 ILKQ13418 452 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 RTL10Q7L3V2 364 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 UHRF2Q96PU4 802 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 PITHD1Q9GZP4 211 aaPredicted RBP13.33□□□□□ -0.28
TRAF1-201ENST00000373887 OSGIN2Q9Y236 505 aa13.33□□□□□ -0.28
TRAF1-201ENST00000373887 RGPD1P0DJD0 1748 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 LOC102725191A0A1B0GVB3 256 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 SHISA7A6NL88 538 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 AGAP14A8MT82 685 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 RPA2P15927 270 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 TPMTP51580 245 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 GPR19Q15760 415 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 KCNJ8Q15842 424 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 TRNP1Q6NT89 227 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 FAM213BQ8TBF2 198 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 LKAAEAR1Q8TD35 194 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 CMSS1Q9BQ75 279 aaKnown RBP13.32□□□□□ -0.28
TRAF1-201ENST00000373887 TEX51A0A1B0GUA7 166 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 GAPDHSO14556 408 aaPredicted RBP13.32□□□□□ -0.28
TRAF1-201ENST00000373887 PRKRAO75569 313 aaKnown RBP13.32□□□□□ -0.28
TRAF1-201ENST00000373887 NME2P22392 152 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 THBS3P49746 956 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 PROX2Q3B8N5 592 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 ATPAF1Q5TC12 328 aaPredicted RBP13.32□□□□□ -0.28
TRAF1-201ENST00000373887 MKXQ8IYA7 352 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 DTWD1Q8N5C7 304 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 SIMC1Q8NDZ2 872 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 TRAPPC2LQ9UL33 140 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 A0A1B0GTW7 788 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 PENKP01210 267 aaPredicted RBP13.32□□□□□ -0.28
TRAF1-201ENST00000373887 CPOXP36551 454 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 UBE2NLQ5JXB2 153 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 OR7E24Q6IFN5 339 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 TMEM64Q6YI46 380 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 VRK2Q86Y07 508 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 KDM8Q8N371 416 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 BPIFB2Q8N4F0 458 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 TANKQ92844 425 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 MYADMQ96S97 322 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 TIMM29Q9BSF4 260 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 TMX2-CTNND1H3BSU7 103 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 HSD17B1P14061 328 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 RNLSQ5VYX0 342 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms