RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 ZSCAN1Q8NBB4 408 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 FAM98AQ8NCA5 519 aaKnown RBP7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 OR10H4Q8NGA5 316 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 OR4F15Q8NGB8 312 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 OR5M3Q8NGP4 307 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 RPS4Y2Q8TD47 263 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 SNX33Q8WV41 574 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 SPRYD4Q8WW59 207 aaPredicted RBP7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 ZC3HAV1LQ96H79 300 aaKnown RBP7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 DIRAS2Q96HU8 199 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 TXNDC15Q96J42 360 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 CDX2Q99626 313 aaPredicted RBP7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 LPAR4Q99677 370 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 C7orf50Q9BRJ6 194 aaKnown RBP7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 ZPBPQ9BS86 351 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 TRAF4Q9BUZ4 470 aaPredicted RBP7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 YIPF2Q9BWQ6 316 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 POTEKPQ9BYX7 375 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 OR8D2Q9GZM6 311 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 SLC22A4Q9H015 551 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 NXF5Q9H1B4 397 aaKnown RBP7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 MARCH7Q9H992 704 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 MOV10Q9HCE1 1003 aaKnown RBP7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 FANCFQ9NPI8 374 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 TMEM74BQ9NUR3 256 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 GRHPRQ9UBQ7 328 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 PLEKHB1Q9UF11 243 aaPredicted RBP7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 TEKT2Q9UIF3 430 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 FKBP7Q9Y680 259 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 COL5A1P20908 1838 aaPredicted RBP7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 IGLV3-32A0A0A0MS00 114 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 CENPVL1A0A0U1RR11 272 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 A0A1W2PQL4 384 aaPredicted RBP7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 XKRYO14609 159 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 LAMTOR5O43504 91 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 FADS1O60427 444 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 FOXD2O60548 495 aaPredicted RBP7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 ZFAND5O76080 213 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 HEXBP07686 556 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 IL9P15248 144 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 MAOBP27338 520 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 APEX1P27695 318 aaKnown RBP7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 ABCD3P28288 659 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 RBMS1P29558 406 aaKnown RBP7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 CRABP1P29762 137 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 EIF1P41567 113 aaKnown RBP7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 RFX3P48380 749 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 EVX1P49640 407 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 SNRPNP63162 240 aaKnown RBP7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 RNF4P78317 190 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 MRPS10P82664 201 aaKnown RBP7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 FABP5Q01469 135 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 PLAURQ03405 335 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 RASGEF1BQ0VAM2 473 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 HNRNPA0Q13151 305 aaKnown RBP7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 TOMM34Q15785 309 aaPredicted RBP7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 ZNF528Q3MIS6 628 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 NKAIN1Q4KMZ8 207 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 SLC25A53Q5H9E4 307 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 OR2G6Q5TZ20 316 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 STEAP3Q658P3 488 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 BICRALQ6AI39 1079 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 RHOUQ7L0Q8 258 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 SHFQ7M4L6 423 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 SLC22A16Q86VW1 577 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 KLBQ86Z14 1044 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 SIRT6Q8N6T7 355 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 NPEPL1Q8NDH3 523 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 ADPRHL1Q8NDY3 354 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 C19orf18Q8NEA5 215 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 OR4N2Q8NGD1 307 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 OR52E2Q8NGJ4 325 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 ABHD4Q8TB40 342 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 SLC22A8Q8TCC7 542 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 SLC25A43Q8WUT9 341 aaPredicted RBP7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 RNF138Q8WVD3 245 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 THAP4Q8WY91 577 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 CCDC74AQ96AQ1 378 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 LOXL4Q96JB6 756 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 SOSTQ9BQB4 213 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 VN1R1Q9GZP7 353 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 SRRQ9GZT4 340 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 SLITRK2Q9H156 845 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 LRRN3Q9H3W5 708 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 ABCB10Q9NRK6 738 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 RXFP3Q9NSD7 469 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 C2orf42Q9NWW7 574 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 UCKL1Q9NWZ5 548 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 TAS2R16Q9NYV7 291 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 COPZ2Q9P299 210 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 MKL2Q9ULH7 1088 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 IER3IP1Q9Y5U9 82 aa7.95□□□□□ -1.14
SNRNP40-202ENST00000373720 LAMA2P24043 3122 aaKnown RBP7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 NUP210LQ5VU65 1888 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 TRAV27A0A087WT01 109 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 A0A087WZY1 265 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 A0A1W2PQ72 361 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 ANKUB1A6NFN9 424 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 TTLL8A6PVC2 850 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 NOTOA8MTQ0 251 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms