RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 TMEM115Q12893 351 aaPredicted RBP14.3□□□□□ -0.12
COL5A1-201ENST00000371817 RPL3LQ92901 407 aaKnown RBP14.3□□□□□ -0.12
COL5A1-201ENST00000371817 FBXL18Q96ME1 805 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 RAB18Q9NP72 206 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 M0R3H8 397 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 MEOX2P50222 304 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 CDKN2DP55273 166 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 AAK1Q2M2I8 961 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 RAET1LQ5VY80 246 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 UQCC3Q6UW78 93 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 MAP6Q96JE9 813 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 CTDSP1Q9GZU7 261 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 NXF5Q9H1B4 397 aaKnown RBP14.3□□□□□ -0.12
COL5A1-201ENST00000371817 DIP2AQ14689 1571 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 SOCS6O14544 535 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 FABP4P15090 132 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 DHRS11Q6UWP2 260 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 C1QTNF2Q9BXJ5 285 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 PLK3Q9H4B4 646 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 ARNTP27540 789 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 HOXA11P31270 313 aaPredicted RBP14.3□□□□□ -0.12
COL5A1-201ENST00000371817 SLC10A6Q3KNW5 377 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 FAM74A1Q5RGS3 127 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 TMEM164Q5U3C3 297 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 RPUSD3Q6P087 351 aaKnown RBP14.3□□□□□ -0.12
COL5A1-201ENST00000371817 FBXO22Q8NEZ5 403 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 OR56B1Q8NGI3 324 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 GPR78Q96P69 363 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 NTPCRQ9BSD7 190 aaKnown RBP14.3□□□□□ -0.12
COL5A1-201ENST00000371817 NRIP3Q9NQ35 241 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 M0R143 59 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 LGALS8O00214 317 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 SHMT2P34897 504 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 DHPSP49366 369 aaPredicted RBP14.29□□□□□ -0.12
COL5A1-201ENST00000371817 EMP3P54852 163 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 FPGSQ05932 587 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 AADACL3Q5VUY0 350 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 TEX261Q6UWH6 196 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 ASPGQ86U10 573 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 NAGSQ8N159 534 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 DMBX1Q8NFW5 382 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 OR5B3Q8NH48 314 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 AK3Q9UIJ7 227 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 MSRAQ9UJ68 235 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 U3KQ87 197 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 NQO2P16083 231 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 ZNF90Q03938 601 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 OR4D1Q15615 310 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 MANEALQ5VSG8 457 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 OR4C11Q6IEV9 310 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 OR9A2Q8NGT5 310 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 CYB5D2Q8WUJ1 264 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 CXXC1Q9P0U4 656 aaPredicted RBP14.29□□□□□ -0.12
COL5A1-201ENST00000371817 KCTD3Q9Y597 815 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 MANSC4A6NHS7 340 aaPredicted RBP14.29□□□□□ -0.12
COL5A1-201ENST00000371817 FKBP1AP62942 108 aaKnown RBP14.29□□□□□ -0.12
COL5A1-201ENST00000371817 ZNF92Q03936 586 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 NNATQ16517 81 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 PRAMEF8Q5VWM4 474 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 PRAMEF7Q5VXH5 474 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 RPL22L1Q6P5R6 122 aaKnown RBP14.29□□□□□ -0.12
COL5A1-201ENST00000371817 OR4N5Q8IXE1 308 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 NANOS1Q8WY41 292 aaKnown RBP14.29□□□□□ -0.12
COL5A1-201ENST00000371817 MZT1Q08AG7 82 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 PHF19Q5T6S3 580 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 TMEM135Q86UB9 458 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 MS4A4EQ96PG1 132 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 MED9Q9NWA0 146 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 CAMK2AQ9UQM7 478 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 CSAG2Q9Y5P2 127 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 PIKFYVEQ9Y2I7 2098 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 FAM189BP81408 668 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 HYAL4Q2M3T9 481 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 PRAMEF19Q5SWL8 479 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 PIP5KL1Q5T9C9 394 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 CPZQ66K79 652 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 CYS1Q717R9 158 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 MRPL21Q7Z2W9 205 aaKnown RBP14.29□□□□□ -0.12
COL5A1-201ENST00000371817 NARFLQ9H6Q4 476 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 M0QZK8 103 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 RNASET2O00584 256 aaKnown RBP14.29□□□□□ -0.12
COL5A1-201ENST00000371817 GGCTO75223 188 aaKnown RBP14.29□□□□□ -0.12
COL5A1-201ENST00000371817 RPS15AP62244 130 aaKnown RBP14.29□□□□□ -0.12
COL5A1-201ENST00000371817 MYOTQ9UBF9 498 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 B4GALT7Q9UBV7 327 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 PCDHGA1Q9Y5H4 931 aa14.29□□□□□ -0.12
COL5A1-201ENST00000371817 EDDM13A0A1B0GTR0 161 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 SULT1A2P50226 295 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 P2RX3P56373 397 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 VASH1Q7L8A9 365 aaPredicted RBP14.28□□□□□ -0.12
COL5A1-201ENST00000371817 SUMF1Q8NBK3 374 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 PSMF1Q92530 271 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 SLC25A46Q96AG3 418 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 SLC9B1P1A6NJY1 282 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 CT45A6P0DMU7 189 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 CT45A5P0DMU8 189 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 CT45A7P0DMV0 189 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 CT45A8P0DMV1 189 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 CT45A9P0DMV2 189 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 SNRPBP14678 240 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms