RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.99□□□□□ -0.65
DEPDC1-201ENST00000370966 TRBV11-1A0A0K0K1C0 115 aa10.99□□□□□ -0.65
DEPDC1-201ENST00000370966 A0A1B0GTL3 188 aa10.99□□□□□ -0.65
DEPDC1-201ENST00000370966 ANKRD33BA6NCL7 494 aa10.99□□□□□ -0.65
DEPDC1-201ENST00000370966 SOCS6O14544 535 aa10.99□□□□□ -0.65
DEPDC1-201ENST00000370966 C1QAP02745 245 aa10.99□□□□□ -0.65
DEPDC1-201ENST00000370966 VASPP50552 380 aaPredicted RBP10.99□□□□□ -0.65
DEPDC1-201ENST00000370966 PSPHP78330 225 aa10.99□□□□□ -0.65
DEPDC1-201ENST00000370966 MELKQ14680 651 aa10.99□□□□□ -0.65
DEPDC1-201ENST00000370966 DUSP6Q16828 381 aa10.99□□□□□ -0.65
DEPDC1-201ENST00000370966 TSSK4Q6SA08 328 aa10.99□□□□□ -0.65
DEPDC1-201ENST00000370966 SLC37A2Q8TED4 501 aa10.99□□□□□ -0.65
DEPDC1-201ENST00000370966 GIMAP5Q96F15 307 aa10.99□□□□□ -0.65
DEPDC1-201ENST00000370966 MAP3K3Q99759 626 aa10.99□□□□□ -0.65
DEPDC1-201ENST00000370966 SPIN2AQ99865 258 aa10.99□□□□□ -0.65
DEPDC1-201ENST00000370966 SPIN2BQ9BPZ2 258 aa10.99□□□□□ -0.65
DEPDC1-201ENST00000370966 PARPBPQ9NWS1 579 aa10.99□□□□□ -0.65
DEPDC1-201ENST00000370966 RCE1Q9Y256 329 aa10.99□□□□□ -0.65
DEPDC1-201ENST00000370966 TRAV36DV7A0A075B6V5 113 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 OR5K3A6NET4 321 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 PTBP1P26599 531 aaKnown RBP eCLIP10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 ETV6P41212 452 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 RAP2BP61225 183 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 CAMK2DQ13557 499 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 ZNF750Q32MQ0 723 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 ZNF385BQ569K4 471 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 UBE2NLQ5JXB2 153 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 SLC35D3Q5M8T2 416 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 B3GLCTQ6Y288 498 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 MED25Q71SY5 747 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 PRICKLE2Q7Z3G6 844 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 CAMKMTQ7Z624 323 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 SGPP2Q8IWX5 399 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 OR13H1Q8NG92 308 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 CCNL2Q96S94 520 aaPredicted RBP10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 FGF21Q9NSA1 209 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 ARRDC5A6NEK1 342 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 ZAR1LA6NP61 321 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 DCNP07585 359 aaKnown RBP10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 APEX1P27695 318 aaKnown RBP10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 S100A2P29034 98 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 SHC1P29353 583 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 MRPL19P49406 292 aaKnown RBP10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 ZP2Q05996 745 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 C17orf67Q0P5P2 114 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 DUSP5Q16690 384 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 CTU2Q2VPK5 515 aaKnown RBP10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 OR6V1Q8N148 313 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 DNAJC5GQ8N7S2 189 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 SDF2Q99470 211 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 TBC1D29Q9UFV1 150 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 LOC102725191A0A1B0GVB3 256 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 ADAM23O75077 832 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 PSMB1P20618 241 aaKnown RBP10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 SLC19A1P41440 591 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 TPMTP51580 245 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 CDKN3Q16667 212 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 SLC7A5P1Q8MH63 180 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 AGBL5Q8NDL9 886 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 CD300LFQ8TDQ1 290 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 SORCS2Q96PQ0 1159 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 NMNAT3Q96T66 252 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 WDR76Q9H967 626 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 PLEKHJ1Q9NW61 149 aa10.98□□□□□ -0.65
DEPDC1-201ENST00000370966 ACOD1A6NK06 481 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 KDM4EB2RXH2 506 aaPredicted RBP10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 FOSL2P15408 326 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 CASP3P42574 277 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 MECP2P51608 486 aaKnown RBP10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 RACK1P63244 317 aaKnown RBP10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 TCTN3Q6NUS6 607 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 CFAP77Q6ZQR2 320 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 PTOV1Q86YD1 416 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 RBM45Q8IUH3 476 aaKnown RBP10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 GLB1L2Q8IW92 636 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 C12orf45Q8N5I9 185 aaPredicted RBP10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 DUSP19Q8WTR2 217 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 TMEM106AQ96A25 262 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 RRNAD1Q96FB5 475 aaKnown RBP10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 SENP5Q96HI0 755 aaPredicted RBP10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 PRDM9Q9NQV7 894 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 CLEC2DQ9UHP7 191 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 PLEKHM1Q9Y4G2 1056 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 SUSD5O60279 629 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 PEX14O75381 377 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 UTS2O95399 124 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 ARHGAP11BQ3KRB8 267 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 BEND4Q6ZU67 534 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 CHST8Q9H2A9 424 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 C1orf198Q9H425 327 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 KCNIP1Q9NZI2 227 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 KCNS2Q9ULS6 477 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 SCN1AP35498 2009 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 ARPC4-TTLL3A0A0A6YYG9 625 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 ATG12O94817 140 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 SNRPBP14678 240 aaKnown RBP10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 EN2P19622 333 aaPredicted RBP10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 GP2P55259 537 aaKnown RBP10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 SLC26A5P58743 744 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms