RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 TRAM2Q15035 370 aa7.98□□□□□ -1.13
TPM3-213ENST00000368545 EBPQ15125 230 aaKnown RBP7.98□□□□□ -1.13
TPM3-213ENST00000368545 MAPK14Q16539 360 aa7.98□□□□□ -1.13
TPM3-213ENST00000368545 KCTD21Q4G0X4 260 aa7.98□□□□□ -1.13
TPM3-213ENST00000368545 ENTPD8Q5MY95 495 aa7.98□□□□□ -1.13
TPM3-213ENST00000368545 ZNF691Q5VV52 312 aa7.98□□□□□ -1.13
TPM3-213ENST00000368545 ZNF770Q6IQ21 691 aaPredicted RBP7.98□□□□□ -1.13
TPM3-213ENST00000368545 ANKRD37Q7Z713 158 aa7.98□□□□□ -1.13
TPM3-213ENST00000368545 PRSS58Q8IYP2 241 aa7.98□□□□□ -1.13
TPM3-213ENST00000368545 CLIP4Q8N3C7 705 aa7.98□□□□□ -1.13
TPM3-213ENST00000368545 SLC5A8Q8N695 610 aa7.98□□□□□ -1.13
TPM3-213ENST00000368545 BCORP1Q8N888 145 aa7.98□□□□□ -1.13
TPM3-213ENST00000368545 AQP11Q8NBQ7 271 aa7.98□□□□□ -1.13
TPM3-213ENST00000368545 OR9Q2Q8NGE9 314 aa7.98□□□□□ -1.13
TPM3-213ENST00000368545 SLC38A4Q969I6 547 aa7.98□□□□□ -1.13
TPM3-213ENST00000368545 LCORQ96JN0 433 aaPredicted RBP7.98□□□□□ -1.13
TPM3-213ENST00000368545 MUS81Q96NY9 551 aa7.98□□□□□ -1.13
TPM3-213ENST00000368545 PITX2Q99697 317 aa7.98□□□□□ -1.13
TPM3-213ENST00000368545 MCHR1Q99705 422 aa7.98□□□□□ -1.13
TPM3-213ENST00000368545 APOL4Q9BPW4 351 aa7.98□□□□□ -1.13
TPM3-213ENST00000368545 WFDC6Q9BQY6 131 aa7.98□□□□□ -1.13
TPM3-213ENST00000368545 FUZQ9BT04 418 aa7.98□□□□□ -1.13
TPM3-213ENST00000368545 MRPS26Q9BYN8 205 aaKnown RBP7.98□□□□□ -1.13
TPM3-213ENST00000368545 HOXD1Q9GZZ0 328 aa7.98□□□□□ -1.13
TPM3-213ENST00000368545 FBXO34Q9NWN3 711 aa7.98□□□□□ -1.13
TPM3-213ENST00000368545 C2orf92A0A1B0GVN3 265 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 SAGE2PA6NJ88 616 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 C9J4A7 227 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 NPIPB9F8W1W9 429 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 H3BNH8 94 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 OR10H3O60404 316 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 MITFO75030 526 aaPredicted RBP7.97□□□□□ -1.13
TPM3-213ENST00000368545 PTP4A3O75365 173 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 CLIC3O95833 236 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 CD63P08962 238 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 CHMP24386 653 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 ITGA3P26006 1051 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 IFNGR2P38484 337 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 RFX3P48380 749 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 ESRRGP62508 458 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 FGFBP1Q14512 234 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 PDZK1Q5T2W1 519 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 APLFQ8IW19 511 aaPredicted RBP7.97□□□□□ -1.13
TPM3-213ENST00000368545 ZNF786Q8N393 782 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 OR4N2Q8NGD1 307 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 SLC7A13Q8TCU3 470 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 ADAMTS16Q8TE57 1224 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 GCDHQ92947 438 aaPredicted RBP7.97□□□□□ -1.13
TPM3-213ENST00000368545 ADIPOR1Q96A54 375 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 CTRCQ99895 268 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 DGCR6LQ9BY27 220 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 ULBP3Q9BZM4 244 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 KRCC1Q9NPI7 259 aaPredicted RBP7.97□□□□□ -1.13
TPM3-213ENST00000368545 MAN2C1Q9NTJ4 1040 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 SLC39A1Q9NY26 324 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 KCNE5Q9UJ90 142 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 NDRG4Q9ULP0 352 aaKnown RBP7.97□□□□□ -1.13
TPM3-213ENST00000368545 PCDHGB5Q9Y5G0 923 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 GMPPBQ9Y5P6 360 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 CENPVL1A0A0U1RR11 272 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 FAM90A18PA6NE21 464 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 FAM90A16PA6NEW6 464 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 CPSF4LA6NMK7 179 aaKnown RBP7.97□□□□□ -1.13
TPM3-213ENST00000368545 FAM90A9PA6NNJ1 464 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 FAM90A5PA8MXJ8 464 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 E9PQ18 207 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 TO15178 435 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 CYP7B1O75881 506 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 IGKV1D-16P01601 117 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 H2AFB1P0C5Y9 115 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 H2AFB2P0C5Z0 115 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 FAM90A15PP0C7V4 464 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 FAM90A14PP0C7W9 464 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 CCL4P13236 92 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 SLC5A2P31639 672 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 PTGER4P35408 488 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 ZNF136P52737 540 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 EMP2P54851 167 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 NUP107P57740 925 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 ARF1P84077 181 aaKnown RBP7.97□□□□□ -1.13
TPM3-213ENST00000368545 COX10Q12887 443 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 NNATQ16517 81 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 RBM48Q5RL73 367 aaKnown RBP7.97□□□□□ -1.13
TPM3-213ENST00000368545 DCAF12Q5T6F0 453 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 LANCL3Q6ZV70 420 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 C9orf40Q8IXQ3 194 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 ABHD4Q8TB40 342 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 ZNF775Q96BV0 537 aaPredicted RBP7.97□□□□□ -1.13
TPM3-213ENST00000368545 GAL3ST4Q96RP7 486 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 NIPSNAP1Q9BPW8 284 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 MESP1Q9BRJ9 268 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 NUDT9Q9BW91 350 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 WWTR1Q9GZV5 400 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 BLOC1S6Q9UL45 172 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 PPIEQ9UNP9 301 aaKnown RBP7.97□□□□□ -1.13
TPM3-213ENST00000368545 SLC35A3Q9Y2D2 325 aa7.97□□□□□ -1.13
TPM3-213ENST00000368545 NPIPA5A0A0B4J1W7 369 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 TRAPPC13A5PLN9 417 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 WIPF3A6NGB9 483 aa7.96□□□□□ -1.13
TPM3-213ENST00000368545 CLDN24A6NM45 220 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms