RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 TAS2R5Q9NYW4 299 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 KLHL13Q9P2N7 655 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 TMEFF2Q9UIK5 374 aaPredicted RBP3.6□□□□□ -1.83
LIG4-201ENST00000356922 CLEC4AQ9UMR7 237 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 MRPS18CQ9Y3D5 142 aaKnown RBP3.6□□□□□ -1.83
LIG4-201ENST00000356922 TRAV27A0A087WT01 109 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 SAC3D1A6NKF1 404 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 ENO4A6NNW6 628 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 MGRN1O60291 552 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 E2F6O75461 281 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 GADD45GO95257 159 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 BAG2O95816 211 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 H1F0P07305 194 aaKnown RBP3.6□□□□□ -1.83
LIG4-201ENST00000356922 CXCR1P25024 350 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 GTF2E2P29084 291 aaKnown RBP3.6□□□□□ -1.83
LIG4-201ENST00000356922 EIF1AXP47813 144 aaKnown RBP3.6□□□□□ -1.83
LIG4-201ENST00000356922 DAPP51397 102 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 POLR2HP52434 150 aaKnown RBP3.6□□□□□ -1.83
LIG4-201ENST00000356922 CASP6P55212 293 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 RAC1P63000 192 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 RUNX1T1Q06455 604 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 LGALS3BPQ08380 585 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 RCN1Q15293 331 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 NHSL2Q5HYW2 709 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 FGD3Q5JSP0 725 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 OTUD3Q5T2D3 398 aaPredicted RBP3.6□□□□□ -1.83
LIG4-201ENST00000356922 C1orf140Q5VVS0 124 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 ADGRE4PQ86SQ3 457 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 RANBP3LQ86VV4 465 aaPredicted RBP3.6□□□□□ -1.83
LIG4-201ENST00000356922 OR51A7Q8NH64 312 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 MOSPD2Q8NHP6 518 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 ST8SIA1Q92185 356 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 UBE2FQ969M7 185 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 ZBTB8AQ96BR9 441 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 TXNDC15Q96J42 360 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 TNFRSF13CQ96RJ3 184 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 FNDC11Q9BVV2 318 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 MUC13Q9H3R2 512 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 MAGIXQ9H6Y5 334 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 TMEM27Q9HBJ8 222 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 ETAA1Q9NY74 926 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 B3GAT1Q9P2W7 334 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 C7orf72A4D263 438 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 LIPT2A6NK58 231 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 B8ZZF3 427 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 TNFRSF11BO00300 401 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 CDK2AP1O14519 115 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 SMAD9O15198 467 aaKnown RBP3.6□□□□□ -1.83
LIG4-201ENST00000356922 SLC19A2O60779 497 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 OR5F1O95221 314 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 BGLAPP02818 100 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 UMPSP11172 480 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 ANPEPP15144 967 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 GNLYP22749 145 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 APOBEC1P41238 236 aaKnown RBP3.6□□□□□ -1.83
LIG4-201ENST00000356922 SUMO3P55854 103 aaPredicted RBP3.6□□□□□ -1.83
LIG4-201ENST00000356922 PON3Q15166 354 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 OR7A5Q15622 319 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 OTPQ5XKR4 325 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 ZNF585AQ6P3V2 769 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 PGBD2Q6P3X8 592 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 TMPPEQ6ZT21 453 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 GCNT2Q8N0V5 402 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 ZIC4Q8N9L1 334 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 OR8D4Q8NGM9 314 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 SLC35B4Q969S0 331 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 GTPBP3Q969Y2 492 aaKnown RBP3.6□□□□□ -1.83
LIG4-201ENST00000356922 PIGQQ9BRB3 760 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 AASSQ9UDR5 926 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 ZNF835Q9Y2P0 537 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 SAMHD1Q9Y3Z3 626 aaKnown RBP3.6□□□□□ -1.83
LIG4-201ENST00000356922 AKAP6Q13023 2319 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 SPG11Q96JI7 2443 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 ELOA3DA6NLF2 546 aaPredicted RBP3.6□□□□□ -1.83
LIG4-201ENST00000356922 A8MVM7 634 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 M0R082 166 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 PTP4A3O75365 173 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 F13BP05160 661 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 ASAH2BP0C7U1 165 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 CPN1P15169 458 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 ABOP16442 354 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 POU3F2P20265 443 aaPredicted RBP3.6□□□□□ -1.83
LIG4-201ENST00000356922 CHMP24386 653 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 PEX2P28328 305 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 ADH6P28332 368 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 FOXG1P55316 489 aaPredicted RBP3.6□□□□□ -1.83
LIG4-201ENST00000356922 ST3GAL3Q11203 375 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 ATP6AP1Q15904 470 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 ZNF74Q16587 644 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 C11orf91Q3C1V1 193 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 ELOA3BQ3SY89 546 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 TMEM236Q5W0B7 351 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 CD163Q86VB7 1156 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 LIX1LQ8IVB5 337 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 C9orf106Q8NAJ2 232 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 ICA1LQ8NDH6 482 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 ELOA3Q8NG57 546 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 OR13C2Q8NGS9 318 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 ZNF417Q8TAU3 575 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 DNAJA4Q8WW22 397 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms