RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 SLC1A3P43003 542 aa13.87□□□□□ -0.19
PDGFA-201ENST00000354513 GYS2P54840 703 aa13.87□□□□□ -0.19
PDGFA-201ENST00000354513 HPCAP84074 193 aa13.87□□□□□ -0.19
PDGFA-201ENST00000354513 LGALS3BPQ08380 585 aa13.87□□□□□ -0.19
PDGFA-201ENST00000354513 PODNL1Q6PEZ8 512 aa13.87□□□□□ -0.19
PDGFA-201ENST00000354513 CLEC2AQ6UVW9 174 aa13.87□□□□□ -0.19
PDGFA-201ENST00000354513 ZNF836Q6ZNA1 936 aa13.87□□□□□ -0.19
PDGFA-201ENST00000354513 LINGO2Q7L985 606 aa13.87□□□□□ -0.19
PDGFA-201ENST00000354513 VRK2Q86Y07 508 aa13.87□□□□□ -0.19
PDGFA-201ENST00000354513 C17orf78Q8N4C9 275 aa13.87□□□□□ -0.19
PDGFA-201ENST00000354513 VPS37AQ8NEZ2 397 aa13.87□□□□□ -0.19
PDGFA-201ENST00000354513 DDIT4LQ96D03 193 aa13.87□□□□□ -0.19
PDGFA-201ENST00000354513 BOD1Q96IK1 185 aa13.87□□□□□ -0.19
PDGFA-201ENST00000354513 RLIMQ9NVW2 624 aa13.87□□□□□ -0.19
PDGFA-201ENST00000354513 AMDHD2Q9Y303 409 aa13.87□□□□□ -0.19
PDGFA-201ENST00000354513 CDHR4A6H8M9 788 aa13.86□□□□□ -0.19
PDGFA-201ENST00000354513 CFAP73A6NFT4 308 aa13.86□□□□□ -0.19
PDGFA-201ENST00000354513 RNF212BA8MTL3 300 aa13.86□□□□□ -0.19
PDGFA-201ENST00000354513 EIF1BO60739 113 aaKnown RBP13.86□□□□□ -0.19
PDGFA-201ENST00000354513 AKR7A3O95154 331 aa13.86□□□□□ -0.19
PDGFA-201ENST00000354513 PGRP06401 933 aa13.86□□□□□ -0.19
PDGFA-201ENST00000354513 GKN3PP0CG01 181 aa13.86□□□□□ -0.19
PDGFA-201ENST00000354513 IGHV4-31P0DP07 118 aa13.86□□□□□ -0.19
PDGFA-201ENST00000354513 ZNF16P17020 682 aaPredicted RBP13.86□□□□□ -0.19
PDGFA-201ENST00000354513 CEACAM7Q14002 265 aa13.86□□□□□ -0.19
PDGFA-201ENST00000354513 SWI5Q1ZZU3 235 aa13.86□□□□□ -0.19
PDGFA-201ENST00000354513 CHRFAM7AQ494W8 412 aa13.86□□□□□ -0.19
PDGFA-201ENST00000354513 HIKESHIQ53FT3 197 aa13.86□□□□□ -0.19
PDGFA-201ENST00000354513 OTUD3Q5T2D3 398 aaPredicted RBP13.86□□□□□ -0.19
PDGFA-201ENST00000354513 KIRREL3Q8IZU9 778 aa13.86□□□□□ -0.19
PDGFA-201ENST00000354513 OR9K2Q8NGE7 335 aa13.86□□□□□ -0.19
PDGFA-201ENST00000354513 PANX1Q96RD7 426 aa13.86□□□□□ -0.19
PDGFA-201ENST00000354513 NELFAQ9H3P2 528 aa13.86□□□□□ -0.19
PDGFA-201ENST00000354513 SLCO1B3Q9NPD5 702 aa13.86□□□□□ -0.19
PDGFA-201ENST00000354513 ATP23Q9Y6H3 246 aa13.86□□□□□ -0.19
PDGFA-201ENST00000354513 IGHV1-18A0A0C4DH31 117 aa13.85□□□□□ -0.19
PDGFA-201ENST00000354513 AQP7P3A6NL99 342 aa13.85□□□□□ -0.19
PDGFA-201ENST00000354513 VWC2LB2RUY7 222 aa13.85□□□□□ -0.19
PDGFA-201ENST00000354513 FRS3O43559 492 aa13.85□□□□□ -0.19
PDGFA-201ENST00000354513 DBIP07108 87 aaKnown RBP13.85□□□□□ -0.19
PDGFA-201ENST00000354513 PRG2P13727 222 aa13.85□□□□□ -0.19
PDGFA-201ENST00000354513 SLC25A16P16260 332 aa13.85□□□□□ -0.19
PDGFA-201ENST00000354513 MPGP29372 298 aa13.85□□□□□ -0.19
PDGFA-201ENST00000354513 DSCR9P59020 149 aa13.85□□□□□ -0.19
PDGFA-201ENST00000354513 BNIP2Q12982 314 aa13.85□□□□□ -0.19
PDGFA-201ENST00000354513 OR7A5Q15622 319 aa13.85□□□□□ -0.19
PDGFA-201ENST00000354513 GTDC1Q4AE62 458 aa13.85□□□□□ -0.19
PDGFA-201ENST00000354513 PMM1Q92871 262 aa13.85□□□□□ -0.19
PDGFA-201ENST00000354513 C7orf26Q96N11 449 aa13.85□□□□□ -0.19
PDGFA-201ENST00000354513 SORCS2Q96PQ0 1159 aa13.85□□□□□ -0.19
PDGFA-201ENST00000354513 OR52E6Q96RD3 313 aa13.85□□□□□ -0.19
PDGFA-201ENST00000354513 NAA11Q9BSU3 229 aaPredicted RBP13.85□□□□□ -0.19
PDGFA-201ENST00000354513 RSPO3Q9BXY4 272 aaPredicted RBP13.85□□□□□ -0.19
PDGFA-201ENST00000354513 WDR55Q9H6Y2 383 aaPredicted RBP13.85□□□□□ -0.19
PDGFA-201ENST00000354513 MTHFD2LQ9H903 347 aaPredicted RBP13.85□□□□□ -0.19
PDGFA-201ENST00000354513 UPB1Q9UBR1 384 aa13.85□□□□□ -0.19
PDGFA-201ENST00000354513 MOKQ9UQ07 419 aa13.85□□□□□ -0.19
PDGFA-201ENST00000354513 TMEM229AB2RXF0 380 aa13.84□□□□□ -0.19
PDGFA-201ENST00000354513 NPIPB7O75200 414 aa13.84□□□□□ -0.19
PDGFA-201ENST00000354513 FAM157CP0CG43 387 aa13.84□□□□□ -0.19
PDGFA-201ENST00000354513 KITP10721 976 aa13.84□□□□□ -0.19
PDGFA-201ENST00000354513 ETFAP13804 333 aa13.84□□□□□ -0.19
PDGFA-201ENST00000354513 IL7RP16871 459 aa13.84□□□□□ -0.19
PDGFA-201ENST00000354513 EFNA4P52798 201 aa13.84□□□□□ -0.19
PDGFA-201ENST00000354513 RAB35Q15286 201 aa13.84□□□□□ -0.19
PDGFA-201ENST00000354513 RPS26P11Q5JNZ5 115 aaPredicted RBP13.84□□□□□ -0.19
PDGFA-201ENST00000354513 ZNF621Q6ZSS3 439 aa13.84□□□□□ -0.19
PDGFA-201ENST00000354513 FAM168AQ92567 244 aa13.84□□□□□ -0.19
PDGFA-201ENST00000354513 CCDC134Q9H6E4 229 aa13.84□□□□□ -0.19
PDGFA-201ENST00000354513 SEC61A2Q9H9S3 476 aa13.84□□□□□ -0.19
PDGFA-201ENST00000354513 PARPBPQ9NWS1 579 aa13.84□□□□□ -0.19
PDGFA-201ENST00000354513 TMEM160Q9NX00 188 aa13.84□□□□□ -0.19
PDGFA-201ENST00000354513 PHF1O43189 567 aaPredicted RBP13.83□□□□□ -0.2
PDGFA-201ENST00000354513 VIMP08670 466 aaKnown RBP13.83□□□□□ -0.2
PDGFA-201ENST00000354513 NR2F1P10589 423 aa13.83□□□□□ -0.2
PDGFA-201ENST00000354513 EPHA3P29320 983 aa13.83□□□□□ -0.2
PDGFA-201ENST00000354513 APOBEC3AP31941 199 aaPredicted RBP13.83□□□□□ -0.2
PDGFA-201ENST00000354513 SELENOPP49908 381 aa13.83□□□□□ -0.2
PDGFA-201ENST00000354513 MAP2K6P52564 334 aa13.83□□□□□ -0.2
PDGFA-201ENST00000354513 TXNL4AP83876 142 aaKnown RBP13.83□□□□□ -0.2
PDGFA-201ENST00000354513 AAED1Q7RTV5 226 aa13.83□□□□□ -0.2
PDGFA-201ENST00000354513 MAVSQ7Z434 540 aa13.83□□□□□ -0.2
PDGFA-201ENST00000354513 SPATA19Q7Z5L4 167 aa13.83□□□□□ -0.2
PDGFA-201ENST00000354513 MYPOPQ86VE0 399 aaPredicted RBP13.83□□□□□ -0.2
PDGFA-201ENST00000354513 EPHX4Q8IUS5 362 aa13.83□□□□□ -0.2
PDGFA-201ENST00000354513 CLIP4Q8N3C7 705 aa13.83□□□□□ -0.2
PDGFA-201ENST00000354513 ARIH2OSQ8N7S6 290 aa13.83□□□□□ -0.2
PDGFA-201ENST00000354513 OR1K1Q8NGR3 316 aa13.83□□□□□ -0.2
PDGFA-201ENST00000354513 VPS33AQ96AX1 596 aa13.83□□□□□ -0.2
PDGFA-201ENST00000354513 AURKBQ96GD4 344 aaPredicted RBP13.83□□□□□ -0.2
PDGFA-201ENST00000354513 SF3B5Q9BWJ5 86 aaKnown RBP13.83□□□□□ -0.2
PDGFA-201ENST00000354513 ZNF443Q9Y2A4 671 aaPredicted RBP13.83□□□□□ -0.2
PDGFA-201ENST00000354513 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.83□□□□□ -0.2
PDGFA-201ENST00000354513 FTCDNL1E5RQL4 147 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 EDF1O60869 148 aaKnown RBP13.82□□□□□ -0.2
PDGFA-201ENST00000354513 FZD7O75084 574 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 LGI1O95970 557 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 BCHEP06276 602 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 GPIP06744 558 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 TFPTP0C1Z6 253 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms