RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 MPPED2Q15777 294 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 ACER2Q5QJU3 275 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 ETV3LQ6ZN32 361 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 SDR9C7Q8NEX9 313 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 ZNRF4Q8WWF5 429 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 TCEAL3Q969E4 200 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 HAVCR1Q96D42 359 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 WBP1LQ9NX94 342 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 UNC119BA6NIH7 251 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 SLC22A31A6NKX4 558 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 TTLL8A6PVC2 850 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 ACOT7O00154 380 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 CCDC157Q569K6 752 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 CORO6Q6QEF8 472 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 MAMSTRQ6ZN01 415 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 JAZF1Q86VZ6 243 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 OR51L1Q8NGJ5 315 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 OR13C2Q8NGS9 318 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 OR9A1PQ8NGU1 263 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 BRI3BPQ8WY22 251 aa13.1□□□□□ -0.31
RLIM-202ENST00000349225 VRK1Q99986 396 aaPredicted RBP13.1□□□□□ -0.31
RLIM-202ENST00000349225 ZNF471Q9BX82 626 aaPredicted RBP13.1□□□□□ -0.31
RLIM-202ENST00000349225 UBE2CO00762 179 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 FGBP02675 491 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 STATHP02808 62 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 RD3LP0DJH9 198 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 C8orf89P0DMQ9 161 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 ZNF44P15621 663 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 RGS8P57771 180 aaPredicted RBP13.09□□□□□ -0.31
RLIM-202ENST00000349225 SIRPAP78324 504 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 TEAD2Q15562 447 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 LRRC37A5PQ49AS3 106 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 DBX2Q6ZNG2 339 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 TMEM150AQ86TG1 271 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 ELP5Q8TE02 316 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 DVL3Q92997 716 aaPredicted RBP13.09□□□□□ -0.31
RLIM-202ENST00000349225 RNF166Q96A37 237 aaPredicted RBP13.09□□□□□ -0.31
RLIM-202ENST00000349225 OR7D2Q96RA2 312 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 LRFN2Q9ULH4 789 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 TRBV2A0A0J9YWF9 115 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 BCL2L11O43521 198 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 ADRA2CP18825 462 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 TMEM115Q12893 351 aaPredicted RBP13.09□□□□□ -0.31
RLIM-202ENST00000349225 MLC1Q15049 377 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 ZCCHC12Q6PEW1 402 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.09□□□□□ -0.31
RLIM-202ENST00000349225 S100A16Q96FQ6 103 aaKnown RBP13.09□□□□□ -0.31
RLIM-202ENST00000349225 SYNPO2LQ9H987 977 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 PRRC2BQ5JSZ5 2229 aaKnown RBP13.09□□□□□ -0.31
RLIM-202ENST00000349225 TMEM82A0PJX8 343 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 LCMT2O60294 686 aaKnown RBP13.09□□□□□ -0.31
RLIM-202ENST00000349225 CTNSO60931 367 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 HEXAP06865 529 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 F3P13726 295 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 GPR143P51810 404 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 PDX1P52945 283 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 ATXN7L3Q14CW9 347 aaPredicted RBP13.09□□□□□ -0.31
RLIM-202ENST00000349225 ZNF793Q6ZN11 406 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 MISPQ8IVT2 679 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 NLGN2Q8NFZ4 835 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 OR6N1Q8NGY5 312 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 SETD7Q8WTS6 366 aaKnown RBP13.09□□□□□ -0.31
RLIM-202ENST00000349225 ZMYND19Q96E35 227 aaPredicted RBP13.09□□□□□ -0.31
RLIM-202ENST00000349225 CLDND1Q9NY35 253 aa13.09□□□□□ -0.31
RLIM-202ENST00000349225 TRAV27A0A087WT01 109 aa13.08□□□□□ -0.31
RLIM-202ENST00000349225 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.08□□□□□ -0.31
RLIM-202ENST00000349225 OR5H14A6NHG9 310 aa13.08□□□□□ -0.31
RLIM-202ENST00000349225 C4orf51C9J302 202 aa13.08□□□□□ -0.31
RLIM-202ENST00000349225 PSMD9O00233 223 aa13.08□□□□□ -0.31
RLIM-202ENST00000349225 ITPKBP27987 946 aa13.08□□□□□ -0.31
RLIM-202ENST00000349225 PSMB5P28074 263 aa13.08□□□□□ -0.31
RLIM-202ENST00000349225 ZNF136P52737 540 aa13.08□□□□□ -0.31
RLIM-202ENST00000349225 NANOS3P60323 173 aaKnown RBP13.08□□□□□ -0.31
RLIM-202ENST00000349225 C4orf46Q504U0 113 aa13.08□□□□□ -0.31
RLIM-202ENST00000349225 MORN1Q5T089 497 aa13.08□□□□□ -0.31
RLIM-202ENST00000349225 ZNF813Q6ZN06 617 aa13.08□□□□□ -0.31
RLIM-202ENST00000349225 Q6ZNB5 142 aa13.08□□□□□ -0.31
RLIM-202ENST00000349225 C11orf96Q7Z7L8 435 aa13.08□□□□□ -0.31
RLIM-202ENST00000349225 CCDC116Q8IYX3 515 aa13.08□□□□□ -0.31
RLIM-202ENST00000349225 CNRIP1Q96F85 164 aaPredicted RBP13.08□□□□□ -0.31
RLIM-202ENST00000349225 PDCD10Q9BUL8 212 aa13.08□□□□□ -0.31
RLIM-202ENST00000349225 PAPOLGQ9BWT3 736 aaKnown RBP13.08□□□□□ -0.31
RLIM-202ENST00000349225 APMAPQ9HDC9 416 aa13.08□□□□□ -0.31
RLIM-202ENST00000349225 CXXC1Q9P0U4 656 aaPredicted RBP13.08□□□□□ -0.31
RLIM-202ENST00000349225 FBXO4Q9UKT5 387 aa13.08□□□□□ -0.31
RLIM-202ENST00000349225 SPTBP11277 2137 aa13.08□□□□□ -0.32
RLIM-202ENST00000349225 A0A0D9SG52 128 aa13.08□□□□□ -0.32
RLIM-202ENST00000349225 A0A1B0GW55 424 aa13.08□□□□□ -0.32
RLIM-202ENST00000349225 CPED1A4D0V7 1026 aa13.08□□□□□ -0.32
RLIM-202ENST00000349225 PRR32B1ATL7 298 aa13.08□□□□□ -0.32
RLIM-202ENST00000349225 GLSO94925 669 aaPredicted RBP13.08□□□□□ -0.32
RLIM-202ENST00000349225 LATS1O95835 1130 aa13.08□□□□□ -0.32
RLIM-202ENST00000349225 CD8AP01732 235 aa13.08□□□□□ -0.32
RLIM-202ENST00000349225 DUX4L2P0CJ85 424 aa13.08□□□□□ -0.32
RLIM-202ENST00000349225 DUX4L3P0CJ86 424 aa13.08□□□□□ -0.32
RLIM-202ENST00000349225 DUX4L4P0CJ87 422 aa13.08□□□□□ -0.32
RLIM-202ENST00000349225 DUX4L5P0CJ88 424 aa13.08□□□□□ -0.32
RLIM-202ENST00000349225 DUX4L6P0CJ89 424 aa13.08□□□□□ -0.32
RLIM-202ENST00000349225 DUX4L7P0CJ90 424 aa13.08□□□□□ -0.32
RLIM-202ENST00000349225 C22orf39Q6P5X5 142 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms