RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 EEF1E1O43324 174 aaKnown RBP9.45□□□□□ -0.9
LIMA1-201ENST00000341247 HCRTR2O43614 444 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 ICOSLGO75144 302 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 UTS2O95399 124 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 F8A1P23610 371 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 SRP9P49458 86 aaKnown RBP9.45□□□□□ -0.9
LIMA1-201ENST00000341247 GDI2P50395 445 aaKnown RBP9.45□□□□□ -0.9
LIMA1-201ENST00000341247 EFNA3P52797 238 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 HSD17B7P56937 341 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 GRM7Q14831 915 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 NSDHLQ15738 373 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 C1QL3Q5VWW1 255 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 OR5M10Q6IEU7 315 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 CEP76Q8TAP6 659 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 THAP4Q8WY91 577 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 PGLYRP3Q96LB9 341 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 PHF7Q9BWX1 381 aaPredicted RBP9.45□□□□□ -0.9
LIMA1-201ENST00000341247 NANSQ9NR45 359 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 IGKV1D-42A0A075B6H8 117 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 ACOD1A6NK06 481 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 LYRM1O43325 122 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 PLGP00747 810 aaPredicted RBP9.45□□□□□ -0.9
LIMA1-201ENST00000341247 CLPSP04118 112 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 GSTT2P0CG29 244 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 GSTT2BP0CG30 244 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 UBL4AP11441 157 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 FOLR1P15328 257 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 CDKN2AP42771 156 aaKnown RBP9.45□□□□□ -0.9
LIMA1-201ENST00000341247 GRK6P43250 576 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 RPS5P46782 204 aaKnown RBP9.45□□□□□ -0.9
LIMA1-201ENST00000341247 CTXN1P60606 82 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 CHRDL2Q6WN34 429 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 MARCH3Q86UD3 253 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 ZNF433Q8N7K0 673 aaPredicted RBP9.45□□□□□ -0.9
LIMA1-201ENST00000341247 FAM181AQ8N9Y4 354 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 TRMT10AQ8TBZ6 339 aaKnown RBP9.45□□□□□ -0.9
LIMA1-201ENST00000341247 SLC25A36Q96CQ1 311 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 KTI12Q96EK9 354 aaPredicted RBP9.45□□□□□ -0.9
LIMA1-201ENST00000341247 FRMD6Q96NE9 622 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 DPYSL5Q9BPU6 564 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.45□□□□□ -0.9
LIMA1-201ENST00000341247 SYNDIG1Q9H7V2 258 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 RNF121Q9H920 327 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 ING1Q9UK53 422 aaPredicted RBP9.45□□□□□ -0.9
LIMA1-201ENST00000341247 TMEM131Q92545 1883 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 A0A1B0GTH9 108 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 C2orf72A6NCS6 295 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 ZNF749O43361 778 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 SCO2O43819 266 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 IDH3BO43837 385 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 SPI1P17947 270 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 RBM34P42696 430 aaKnown RBP9.45□□□□□ -0.9
LIMA1-201ENST00000341247 CENPAP49450 140 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 RACK1P63244 317 aaKnown RBP9.45□□□□□ -0.9
LIMA1-201ENST00000341247 GPALPP1Q8IXQ4 340 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 NPEPL1Q8NDH3 523 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 HSD17B8Q92506 261 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 HOXB13Q92826 284 aaPredicted RBP9.45□□□□□ -0.9
LIMA1-201ENST00000341247 ZNF486Q96H40 463 aaPredicted RBP9.45□□□□□ -0.9
LIMA1-201ENST00000341247 COQ7Q99807 217 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 PRODH2Q9UF12 536 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 EML5Q05BV3 1969 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 EFCAB7A8K855 629 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 PLPP2O43688 288 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 TACR3P29371 465 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 TALDO1P37837 337 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 MTNR1BP49286 362 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 SLC37A1P57057 533 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 HNRNPKP61978 463 aaKnown RBP eCLIP9.44□□□□□ -0.9
LIMA1-201ENST00000341247 ZFP69Q49AA0 526 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 C14orf28Q4W4Y0 310 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 HBMQ6B0K9 141 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 LINC00114Q6XXX2 140 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 GPR135Q8IZ08 494 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 ZSCAN1Q8NBB4 408 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 OR1L3Q8NH93 324 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 FAM174AQ8TBP5 190 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 SLC2A12Q8TD20 617 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 CHAC2Q8WUX2 184 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 ZDHHC12Q96GR4 267 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 ST6GAL2Q96JF0 529 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 NUDT9Q9BW91 350 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 UBQLN4Q9NRR5 601 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 PLSCR3Q9NRY6 295 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 LANCL2Q9NS86 450 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 FER1L5A0AVI2 2057 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 MED12Q93074 2177 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 PRR32B1ATL7 298 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 DCTN6O00399 190 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 OR7A10O76100 309 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 PRKAR1AP10644 381 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 GLULP15104 373 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 TCEA1P23193 301 aaKnown RBP9.44□□□□□ -0.9
LIMA1-201ENST00000341247 MST1P26927 711 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 CLDN12P56749 244 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 IGLV3-21P80748 117 aaPredicted RBP9.44□□□□□ -0.9
LIMA1-201ENST00000341247 CFHR1Q03591 330 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 TATDN3Q17R31 274 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 KLHL26Q53HC5 615 aa9.44□□□□□ -0.9
LIMA1-201ENST00000341247 TCTE1Q5JU00 501 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms