RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 BTBD16Q32M84 506 aa13.59□□□□□ -0.23
UBA1-201ENST00000335972 KIAA0895LQ68EN5 471 aa13.59□□□□□ -0.23
UBA1-201ENST00000335972 ZCCHC12Q6PEW1 402 aa13.59□□□□□ -0.23
UBA1-201ENST00000335972 KCNJ15Q99712 375 aa13.59□□□□□ -0.23
UBA1-201ENST00000335972 DHCR7Q9UBM7 475 aaKnown RBP13.59□□□□□ -0.23
UBA1-201ENST00000335972 SERINC4A6NH21 518 aa13.58□□□□□ -0.23
UBA1-201ENST00000335972 AK1P00568 194 aa13.58□□□□□ -0.23
UBA1-201ENST00000335972 GIFP27352 417 aa13.58□□□□□ -0.23
UBA1-201ENST00000335972 CDKN2AP42771 156 aaKnown RBP13.58□□□□□ -0.23
UBA1-201ENST00000335972 ATP12AP54707 1039 aa13.58□□□□□ -0.23
UBA1-201ENST00000335972 FGFBP1Q14512 234 aa13.58□□□□□ -0.23
UBA1-201ENST00000335972 STPG1Q5TH74 334 aa13.58□□□□□ -0.23
UBA1-201ENST00000335972 LRRC28Q86X40 367 aaPredicted RBP13.58□□□□□ -0.23
UBA1-201ENST00000335972 GALNT6Q8NCL4 622 aa13.58□□□□□ -0.23
UBA1-201ENST00000335972 OR51Q1Q8NH59 317 aa13.58□□□□□ -0.23
UBA1-201ENST00000335972 C3orf49Q96BT1 292 aa13.58□□□□□ -0.23
UBA1-201ENST00000335972 SLC38A3Q99624 504 aa13.58□□□□□ -0.23
UBA1-201ENST00000335972 RTN4RQ9BZR6 473 aa13.58□□□□□ -0.23
UBA1-201ENST00000335972 NOX4Q9NPH5 578 aa13.58□□□□□ -0.23
UBA1-201ENST00000335972 C14orf105Q9NVL8 296 aa13.58□□□□□ -0.23
UBA1-201ENST00000335972 NCDNQ9UBB6 729 aa13.58□□□□□ -0.23
UBA1-201ENST00000335972 HS3ST3A1Q9Y663 406 aa13.58□□□□□ -0.23
UBA1-201ENST00000335972 A0A0A6YYJ9 748 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 FAM172BPA6NC97 362 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 C17orf105B2RV13 164 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 DCTN6O00399 190 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 ORC5O43913 435 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 RAD1O60671 282 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 OR8G3PP0DMU2 310 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 DMDP11532 3685 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 MLLT3P42568 568 aaPredicted RBP13.58□□□□□ -0.24
UBA1-201ENST00000335972 NRG3P56975 720 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 RPL13AP3Q6NVV1 102 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 LYPD8Q6UX82 237 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 SHISA6Q6ZSJ9 500 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 TTLL10Q6ZVT0 673 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 SIAH3Q8IW03 269 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 GPALPP1Q8IXQ4 340 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 LGALS14Q8TCE9 139 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 TRIM63Q969Q1 353 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 MS4A3Q96HJ5 214 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 HSPB11Q9Y547 144 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 CTNSO60931 367 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 HLA-DQB1P01920 261 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 SPI1P17947 270 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 NANOS3P60323 173 aaKnown RBP13.58□□□□□ -0.24
UBA1-201ENST00000335972 SIRPAP78324 504 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 CCINQ13939 588 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 NPEPL1Q8NDH3 523 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 DNAAF1Q8NEP3 725 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 FAM174AQ8TBP5 190 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 ADOQ96SZ5 270 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 LMF2Q9BU23 707 aaKnown RBP13.58□□□□□ -0.24
UBA1-201ENST00000335972 ZNF426Q9BUY5 554 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 ZNF222Q9UK12 451 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 KLHDC2Q9Y2U9 406 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 EML5Q05BV3 1969 aa13.58□□□□□ -0.24
UBA1-201ENST00000335972 ELOA3DA6NLF2 546 aaPredicted RBP13.57□□□□□ -0.24
UBA1-201ENST00000335972 GPR3P46089 330 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 GBX2P52951 348 aaPredicted RBP13.57□□□□□ -0.24
UBA1-201ENST00000335972 ELOA3BQ3SY89 546 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 C1QL3Q5VWW1 255 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 ELOA3Q8NG57 546 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 LILRB4Q8NHJ6 448 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 JAM3Q9BX67 310 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 TMEM72A0PK05 275 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 RGS13O14921 159 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 WNT1P04628 370 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 ANKRD34CP0C6C1 535 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 NPR2P20594 1047 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 BDH1Q02338 343 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 CDK5R1Q15078 307 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 PRTGQ2VWP7 1150 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 METAP1DQ6UB28 335 aaPredicted RBP13.57□□□□□ -0.24
UBA1-201ENST00000335972 DUSP18Q8NEJ0 188 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 GDF15Q99988 308 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 NXF5Q9H1B4 397 aaKnown RBP13.57□□□□□ -0.24
UBA1-201ENST00000335972 CACNG2Q9Y698 323 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 ASCC3Q8N3C0 2202 aaKnown RBP13.57□□□□□ -0.24
UBA1-201ENST00000335972 PCNX3Q9H6A9 2034 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 IGKV1D-42A0A075B6H8 117 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 CLDN4O14493 209 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 PLGP00747 810 aaPredicted RBP13.57□□□□□ -0.24
UBA1-201ENST00000335972 PROS1P07225 676 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 ZNF24P17028 368 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 IGFBP4P22692 258 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 AHCYP23526 432 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 BTCP35070 178 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 RPS11P62280 158 aaKnown RBP eCLIP13.57□□□□□ -0.24
UBA1-201ENST00000335972 SFRP4Q6FHJ7 346 aaPredicted RBP13.57□□□□□ -0.24
UBA1-201ENST00000335972 ARHGEF39Q8N4T4 335 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 MARVELD1Q9BSK0 173 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 THADAQ6YHU6 1953 aa13.57□□□□□ -0.24
UBA1-201ENST00000335972 MED12Q93074 2177 aa13.56□□□□□ -0.24
UBA1-201ENST00000335972 ANKRD34BA5PLL1 514 aa13.56□□□□□ -0.24
UBA1-201ENST00000335972 FLRT2O43155 660 aa13.56□□□□□ -0.24
UBA1-201ENST00000335972 EPXP11678 715 aa13.56□□□□□ -0.24
UBA1-201ENST00000335972 RRAS2P62070 204 aaPredicted RBP13.56□□□□□ -0.24
UBA1-201ENST00000335972 FAPQ12884 760 aa13.56□□□□□ -0.24
UBA1-201ENST00000335972 FAAP20Q6NZ36 180 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms